RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 PRMT2P55345 433 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 GTF2BQ00403 316 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 PURAQ00577 322 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 CAPSQ13938 189 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 KRT31Q15323 416 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 LRRC55Q6ZSA7 311 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 FAM114A1Q8IWE2 563 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SPC24Q8NBT2 197 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 ANKRD20A12PQ8NF67 263 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 CNOT6LQ96LI5 555 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 ACCSQ96QU6 501 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 GBP3Q9H0R5 595 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 TAB2Q9NYJ8 693 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SUCLA2Q9P2R7 463 aaPredicted RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 PES1O00541 588 aaKnown RBP11.46□□□□□ -0.58
TCF4-236ENST00000567880 MAGEB2O15479 319 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 TGFB1I1O43294 461 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 FGFR1OPO95684 399 aaKnown RBP11.46□□□□□ -0.58
TCF4-236ENST00000567880 NR3C1P04150 777 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 SPAG1Q07617 926 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 LAMTOR4Q0VGL1 99 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 ADAM9Q13443 819 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 AMHR2Q16671 573 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 PTPN21Q16825 1174 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 EDRF1Q3B7T1 1238 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 MTHFD1LQ6UB35 978 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 HS2ST1Q7LGA3 356 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 SH3TC2Q8TF17 1288 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 LMBR1Q8WVP7 490 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 NLRP4Q96MN2 994 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 NTPCRQ9BSD7 190 aaKnown RBP11.46□□□□□ -0.58
TCF4-236ENST00000567880 KATNAL1Q9BW62 490 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 MFRPQ9BY79 579 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 UPF3AQ9H1J1 476 aaKnown RBP11.46□□□□□ -0.58
TCF4-236ENST00000567880 VPS16Q9H269 839 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 TMEM206Q9H813 350 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 DDX20Q9UHI6 824 aaKnown RBP11.46□□□□□ -0.58
TCF4-236ENST00000567880 TBX20Q9UMR3 447 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 AKT3Q9Y243 479 aa11.46□□□□□ -0.58
TCF4-236ENST00000567880 TISP43B9A030 160 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 CBFA2T2O43439 604 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 ZEB2O60315 1214 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 ADAMTS4O75173 837 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 MYCP01106 439 aaPredicted RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 EEF1GP26641 437 aaKnown RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 TMOD1P28289 359 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 MTIF2P46199 727 aaKnown RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 CCDC40Q4G0X9 1142 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 MARCH8Q5T0T0 291 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 RNF149Q8NC42 400 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 BICD1Q96G01 975 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 PDLIM2Q96JY6 352 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 HMX1Q9NP08 348 aaPredicted RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 AGPAT3Q9NRZ7 376 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 ARHGAP28Q9P2N2 729 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 KCNG1Q9UIX4 513 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 NRCAMQ92823 1304 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 RRN3P2A6NIE6 340 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 ESPNB1AK53 854 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 H0YCG3 227 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 K7ERI5 159 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 HAS3O00219 553 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 CETN3O15182 167 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 VTNP04004 478 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 RPL13P26373 211 aaKnown RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 CYP2J2P51589 502 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 STRN3Q13033 797 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 NFRKBQ6P4R8 1299 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 APTXQ7Z2E3 356 aaKnown RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 C7orf31Q8N865 590 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 MRFAP1L1Q96HT8 127 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 CTAGE1Q96RT6 745 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 PPP1R9BQ96SB3 815 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 MTG1Q9BT17 334 aaPredicted RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 LIMA1Q9UHB6 759 aaKnown RBP11.45□□□□□ -0.58
TCF4-236ENST00000567880 EXOC7Q9UPT5 735 aa11.45□□□□□ -0.58
TCF4-236ENST00000567880 HNRNPDLO14979 420 aaKnown RBP11.44□□□□□ -0.58
TCF4-236ENST00000567880 N4BP3O15049 544 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 KPNA6O60684 536 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 PTMAP06454 111 aaKnown RBP11.44□□□□□ -0.58
TCF4-236ENST00000567880 TPM3P06753 285 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 ASGR1P07306 291 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 COPB1P53618 953 aaKnown RBP11.44□□□□□ -0.58
TCF4-236ENST00000567880 TFDP1Q14186 410 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 KCNA10Q16322 511 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 TAS1R3Q7RTX0 852 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms