RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 IFT74Q96LB3 600 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 TIPINQ9BVW5 301 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 MTMR10Q9NXD2 777 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 DACT1Q9NYF0 836 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 KCND2Q9NZV8 630 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
NSMCE1-213ENST00000567710 ADGRA3Q8IWK6 1321 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 A0A087X0B3 334 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 A0A0U1RQF3 1178 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 TSPAN1O60635 241 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 CUTAO60888 179 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 DGKIO75912 1065 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 ERLIN2O94905 339 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 HOXA11P31270 313 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 KRT85P78386 507 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 RAD51AP2Q09MP3 1159 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 DHX8Q14562 1220 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 MCM6Q14566 821 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 AMHR2Q16671 573 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 ARSHQ5FYA8 562 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 AXDND1Q5T1B0 1012 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 RRAGBQ5VZM2 374 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 TWF2Q6IBS0 349 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 SPRED2Q7Z698 418 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 ECHDC2Q86YB7 292 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 ZBTB8OSQ8IWT0 167 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 DEPTORQ8TB45 409 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 DRC1Q96MC2 740 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 GUCD1Q96NT3 240 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 KIFC3Q9BVG8 833 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 C2orf40Q9H1Z8 148 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 TMEM161AQ9NX61 479 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 STK17AQ9UEE5 414 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 RCOR1Q9UKL0 485 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 COL4A6Q14031 1691 aa11.89□□□□□ -0.51
NSMCE1-213ENST00000567710 NPHP3-ACAD11A0A0J9YXS1 232 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 ATF7P17544 494 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 AXLP30530 894 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 NPTX2P47972 431 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 ME1P48163 572 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 GATMP50440 423 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 PEX3P56589 373 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 NUCB2P80303 420 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 DMP1Q13316 513 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 NAALADL2Q58DX5 795 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 SHC4Q6S5L8 630 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 CCDC73Q6ZRK6 1079 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 CPB2Q96IY4 423 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 PRMT7Q9NVM4 692 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-213ENST00000567710 EPOPA6NHQ4 379 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 CCDC169A6NNP5 214 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 SFI1A8K8P3 1242 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 B4GALT5O43286 388 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PRKCBP05771 671 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 FGFR1P11362 822 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 ARF4P18085 180 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 ANP32AP39687 249 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 STAT6P42226 847 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 RAB27AP51159 221 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 BTG3Q14201 252 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 FAM187BQ17R55 369 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PAN2Q504Q3 1202 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 UBXN11Q5T124 520 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 NOTUMQ6P988 496 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 CMTR2Q8IYT2 770 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 FIBCD1Q8N539 461 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PDILTQ8N807 584 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 RNF169Q8NCN4 708 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 ARNTL2Q8WYA1 636 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PRIMPOLQ96LW4 560 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 REEP2Q9BRK0 252 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PANK2Q9BZ23 570 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 CCDC113Q9H0I3 377 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 FZD8Q9H461 694 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 PRDM12Q9H4Q4 367 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 C17orf75Q9HAS0 396 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 FAM105AQ9NUU6 356 aa11.87□□□□□ -0.51
NSMCE1-213ENST00000567710 RNF19AQ9NV58 838 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms