RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 FGF18O76093 207 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 OR52Z1P0C646 297 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 MCM2P49736 904 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 KRT17Q04695 432 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 NCBP1Q09161 790 aaKnown RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 HYAL1Q12794 435 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 ADAM15Q13444 863 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 TFDP1Q14186 410 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 PDIA5Q14554 519 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 CTC1Q2NKJ3 1217 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 CLLU1OSQ5K130 101 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 PTCRAQ6ISU1 281 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 PDE12Q6L8Q7 609 aaKnown RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 KCNT2Q6UVM3 1135 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 CATSPER3Q86XQ3 398 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 THNSL1Q8IYQ7 743 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 C4orf32Q8N8J7 132 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 RNF149Q8NC42 400 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 ERMNQ8TAM6 284 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 HELQQ8TDG4 1101 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 PIGOQ8TEQ8 1089 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 RSPH1Q8WYR4 309 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 TMX3Q96JJ7 454 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 CCDC43Q96MW1 224 aaKnown RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 ZNF558Q96NG5 402 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 NECAB3Q96P71 396 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 NACC1Q96RE7 527 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 POLR3CQ9BUI4 534 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 MINDY3Q9H8M7 445 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 BMP2KQ9NSY1 1161 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 CLDND1Q9NY35 253 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 SPG21Q9NZD8 308 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 HCSTQ9UBK5 93 aa7.7□□□□□ -1.18
SF3B3-209ENST00000567635 PIN4Q9Y237 131 aaKnown RBP7.7□□□□□ -1.18
SF3B3-209ENST00000567635 GRXCR2A6NFK2 248 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 H3BQ06 376 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 CSPG5O95196 566 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 ATF7P17544 494 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 MUTP22033 750 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 RPA1P27694 616 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 AXLP30530 894 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 HOXA11P31270 313 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 GTF2F1P35269 517 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 IRS1P35568 1242 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 ARL2P36404 184 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 LTBRP36941 435 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 NRIP1P48552 1158 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 ALDH7A1P49419 539 aaKnown RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 RARRES1P49788 294 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 TOB1P50616 345 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 RAB27AP51159 221 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 PTENP60484 403 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 ERVFC1P60507 584 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 PTGDRQ13258 359 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 PCBP1Q15365 356 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 LONRF3Q496Y0 759 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 NOMO2Q5JPE7 1267 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 MCTP1Q6DN14 999 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 GLB1LQ6UWU2 654 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 MRPL10Q7Z7H8 261 aaKnown RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 RBM23Q86U06 439 aaKnown RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 IFNLR1Q8IU57 520 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 LRRC43Q8N309 656 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 MRPS27Q92552 414 aaKnown RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 PGBD4Q96DM1 585 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 TBC1D32Q96NH3 1257 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 TLE6Q9H808 572 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 XPNPEP1Q9NQW7 623 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 TLR9Q9NR96 1032 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 TSHZ2Q9NRE2 1034 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 AGPAT5Q9NUQ2 364 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 FAM105AQ9NUU6 356 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 DBR1Q9UK59 544 aaKnown RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 FAM50BQ9Y247 325 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 LZTS1Q9Y250 596 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 PCDHB2Q9Y5E7 798 aa7.69□□□□□ -1.18
SF3B3-209ENST00000567635 MTCL1Q9Y4B5 1905 aaKnown RBP7.69□□□□□ -1.18
SF3B3-209ENST00000567635 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 INO80B-WBP1J3KQ70 363 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 LAD1O00515 517 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 MED24O75448 989 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 OFD1O75665 1012 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 ERLIN2O94905 339 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 CD2BP2O95400 341 aaKnown RBP7.68□□□□□ -1.18
SF3B3-209ENST00000567635 PPM1AP35813 382 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 CCT6AP40227 531 aaKnown RBP7.68□□□□□ -1.18
SF3B3-209ENST00000567635 BCAR1P56945 870 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 RNASELQ05823 741 aaKnown RBP7.68□□□□□ -1.18
SF3B3-209ENST00000567635 NBR1Q14596 966 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 UBXN11Q5T124 520 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 ADGRD2Q7Z7M1 963 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 FAM178BQ8IXR5 827 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 EFHBQ8N7U6 833 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 CNNM3Q8NE01 707 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 MCPH1Q8NEM0 835 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 ASAP3Q8TDY4 903 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 LPPQ93052 612 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms