RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 AIFM3Q96NN9 605 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 PRRX2Q99811 253 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
LINC01238-205ENST00000567549 FAM105AQ9NUU6 356 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 RNF19AQ9NV58 838 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 MUTYHQ9UIF7 546 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 NR2E1Q9Y466 385 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 ZC3H11AO75152 810 aaKnown RBP eCLIP20.79■□□□□ 0.92
LINC01238-205ENST00000567549 FGFR4P22455 802 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 BCAR1P56945 870 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 MXD4Q14582 209 aaPredicted RBP20.79■□□□□ 0.92
LINC01238-205ENST00000567549 MRPL43Q8N983 215 aaKnown RBP20.79■□□□□ 0.92
LINC01238-205ENST00000567549 CEP89Q96ST8 783 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 LXNQ9BS40 222 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 UBN1Q9NPG3 1134 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 DZANK1Q9NVP4 752 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 VAV3Q9UKW4 847 aa20.79■□□□□ 0.92
LINC01238-205ENST00000567549 ERLIN2O94905 339 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 STBD1O95210 358 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 YWHABP31946 246 aaKnown RBP20.78■□□□□ 0.92
LINC01238-205ENST00000567549 DRP2Q13474 957 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 TFDP1Q14186 410 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 NOMO2Q5JPE7 1267 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 NCAPH2Q6IBW4 605 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 PPFIBP1Q86W92 1011 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 SUSD6Q92537 303 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 FAM193BQ96PV7 902 aaPredicted RBP20.78■□□□□ 0.92
LINC01238-205ENST00000567549 DHX33Q9H6R0 707 aaKnown RBP20.78■□□□□ 0.92
LINC01238-205ENST00000567549 AGPAT5Q9NUQ2 364 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 HCSTQ9UBK5 93 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 PCDHGC5Q9Y5F6 944 aa20.78■□□□□ 0.92
LINC01238-205ENST00000567549 AXLP30530 894 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 XKR9Q5GH70 373 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 PLA2G4FQ68DD2 849 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 ELMSAN1Q6PJG2 1045 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 BMP8AQ7Z5Y6 402 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 SUGP1Q8IWZ8 645 aaKnown RBP20.77■□□□□ 0.92
LINC01238-205ENST00000567549 HACE1Q8IYU2 909 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 RPGRIP1Q96KN7 1286 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 RIPOR3Q96MK2 946 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 MTRQ99707 1265 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 PCDHA12Q9UN75 941 aa20.77■□□□□ 0.92
LINC01238-205ENST00000567549 TMEM150BA6NC51 233 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 EML1O00423 815 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 CSDE1O75534 798 aaKnown RBP20.76■□□□□ 0.91
LINC01238-205ENST00000567549 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
LINC01238-205ENST00000567549 MTHFRP42898 656 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 EMC2Q15006 297 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 LLGL2Q6P1M3 1020 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 ZBTB33Q86T24 672 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 DDX53Q86TM3 631 aaKnown RBP20.76■□□□□ 0.91
LINC01238-205ENST00000567549 PRPF31Q8WWY3 499 aaKnown RBP20.76■□□□□ 0.91
LINC01238-205ENST00000567549 CCDC51Q96ER9 411 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 SH2D3AQ9BRG2 576 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 SSX2IPQ9Y2D8 614 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 IRAK3Q9Y616 596 aa20.76■□□□□ 0.91
LINC01238-205ENST00000567549 C2orf71A6NGG8 1288 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 NR1I2O75469 434 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 CXCL14O95715 111 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 PBX3P40426 434 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 AK2P54819 239 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 NPEPPSP55786 919 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 LAMTOR4Q0VGL1 99 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 KCNC3Q14003 757 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 SAFBQ15424 915 aaKnown RBP eCLIP20.75■□□□□ 0.91
LINC01238-205ENST00000567549 CALCRLQ16602 461 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 TRIM67Q6ZTA4 783 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 VPS52Q8N1B4 723 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 IFT122Q9HBG6 1241 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 TBC1D13Q9NVG8 400 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
LINC01238-205ENST00000567549 INPP5FQ9Y2H2 1132 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 PCDHB2Q9Y5E7 798 aa20.75■□□□□ 0.91
LINC01238-205ENST00000567549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.74■□□□□ 0.91
LINC01238-205ENST00000567549 SPDYE4A6NLX3 237 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 HIDE1A8MVS5 230 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 SRGAP2CP0DJJ0 459 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 POU5F1BQ06416 359 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 TPH2Q8IWU9 490 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 RNF149Q8NC42 400 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 HAS1Q92839 578 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 GTF3C6Q969F1 213 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 IGSF21Q96ID5 467 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 TMEM175Q9BSA9 504 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 EMILIN2Q9BXX0 1053 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 RSAD1Q9HA92 442 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 DPP7Q9UHL4 492 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 HCFC2Q9Y5Z7 792 aa20.74■□□□□ 0.91
LINC01238-205ENST00000567549 NEMFO60524 1076 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 DGAT1O75907 488 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 LYPLA2O95372 231 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 ALDH2P05091 517 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 CTSAP10619 480 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 ZXDAP98168 799 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 SIGLEC14Q08ET2 396 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 NOTUMQ6P988 496 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 HFE2Q6ZVN8 426 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 FERMT3Q86UX7 667 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms