RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
CDR2-206ENST00000567406 PRPF31Q8WWY3 499 aaKnown RBP17.11■□□□□ 0.33
CDR2-206ENST00000567406 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 NRDE2Q9H7Z3 1164 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 IFT122Q9HBG6 1241 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 CHST12Q9NRB3 414 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 B4GALT3O60512 393 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 CLASP2O75122 1294 aaKnown RBP17.1■□□□□ 0.33
CDR2-206ENST00000567406 OFD1O75665 1012 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 WEE2P0C1S8 567 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 ALDH7A1P49419 539 aaKnown RBP17.1■□□□□ 0.33
CDR2-206ENST00000567406 CDC42EP1Q00587 391 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 CBX2Q14781 532 aaPredicted RBP17.1■□□□□ 0.33
CDR2-206ENST00000567406 TMEM184AQ6ZMB5 413 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 ZNF410Q86VK4 478 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 C12orf76Q8N812 135 aaPredicted RBP17.1■□□□□ 0.33
CDR2-206ENST00000567406 FEZF2Q8TBJ5 459 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 FBXL18Q96ME1 805 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 LXNQ9BS40 222 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 TBC1D13Q9NVG8 400 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
CDR2-206ENST00000567406 A0A087WWV3 80 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 WNT7AO00755 349 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 XBP1P17861 261 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 ZXDAP98168 799 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 SMC1AQ14683 1233 aaKnown RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 EPHA7Q15375 998 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 ME3Q16798 604 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 NOMO2Q5JPE7 1267 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 FAM177A1Q8N128 213 aaPredicted RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 VPS52Q8N1B4 723 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 INO80BQ9C086 356 aaPredicted RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
CDR2-206ENST00000567406 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
CDR2-206ENST00000567406 TMEM221A6NGB7 291 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 M0R296 226 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 GALTP07902 379 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 GCFC2P16383 781 aaKnown RBP17.08■□□□□ 0.32
CDR2-206ENST00000567406 YWHABP31946 246 aaKnown RBP17.08■□□□□ 0.32
CDR2-206ENST00000567406 SLC11A1P49279 550 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 RNASELQ05823 741 aaKnown RBP17.08■□□□□ 0.32
CDR2-206ENST00000567406 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 XKR9Q5GH70 373 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 GLB1LQ6UWU2 654 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 TRIM67Q6ZTA4 783 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 TPH2Q8IWU9 490 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 PSPC1Q8WXF1 523 aaKnown RBP17.08■□□□□ 0.32
CDR2-206ENST00000567406 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
CDR2-206ENST00000567406 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 ZNF318Q5VUA4 2279 aa17.08■□□□□ 0.32
CDR2-206ENST00000567406 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.07■□□□□ 0.32
CDR2-206ENST00000567406 JAK2O60674 1132 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 DDHD2O94830 711 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 NEFLP07196 543 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
CDR2-206ENST00000567406 KRT2P35908 639 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 EMC2Q15006 297 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 IER5LQ5T953 404 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 C4orf19Q8IY42 314 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 RNF149Q8NC42 400 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 CASP10Q92851 521 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 IGSF21Q96ID5 467 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 ZBP1Q9H171 429 aa17.07■□□□□ 0.32
CDR2-206ENST00000567406 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 TBX3O15119 743 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 DKC1O60832 514 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDR2-206ENST00000567406 ZNF623O75123 536 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 SLITRK3O94933 977 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 POMCP01189 267 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDR2-206ENST00000567406 SKIP12755 728 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 EPCAMP16422 314 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 RFC5P40937 340 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 RARS2Q5T160 578 aaKnown RBP17.06■□□□□ 0.32
CDR2-206ENST00000567406 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 EIF2AK1Q9BQI3 630 aaKnown RBP17.06■□□□□ 0.32
CDR2-206ENST00000567406 POMKQ9H5K3 350 aa17.06■□□□□ 0.32
CDR2-206ENST00000567406 XPNPEP1Q9NQW7 623 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms