RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 POLR2DO15514 142 aaKnown RBP16.74■□□□□ 0.27
COMMD4-219ENST00000567399 AMPD3Q01432 767 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 SLC24A5Q71RS6 500 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 RTN4RL1Q86UN2 441 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-219ENST00000567399 CEP57L1Q8IYX8 460 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 RNF169Q8NCN4 708 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 TOP1MTQ969P6 601 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 LRCH3Q96II8 777 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 YME1L1Q96TA2 773 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 NFKBIZQ9BYH8 718 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 MINDY3Q9H8M7 445 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 C17orf75Q9HAS0 396 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 LARSQ9P2J5 1176 aaKnown RBP16.74■□□□□ 0.27
COMMD4-219ENST00000567399 KCNH3Q9ULD8 1083 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 ODF2LQ9ULJ1 636 aa16.74■□□□□ 0.27
COMMD4-219ENST00000567399 SIP14410 1827 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 LOXHD1Q8IVV2 1947 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 K7ERI5 159 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 SOX1O00570 391 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-219ENST00000567399 MGEA5O60502 916 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 GJB5O95377 273 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 PLS3P13797 630 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 CMA1P23946 247 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 PBX2P40425 430 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 SARSP49591 514 aaKnown RBP16.73■□□□□ 0.27
COMMD4-219ENST00000567399 EFNA5P52803 228 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 MBTD1Q05BQ5 628 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 MAPK6Q16659 721 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 NPAS4Q8IUM7 802 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 TIFAQ96CG3 184 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 RAD9AQ99638 391 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 REEP2Q9BRK0 252 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 CUEDC2Q9H467 287 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 PRMT7Q9NVM4 692 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-219ENST00000567399 INSL6Q9Y581 213 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 PCDHA11Q9Y5I1 949 aa16.73■□□□□ 0.27
COMMD4-219ENST00000567399 A0A087X0B3 334 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-219ENST00000567399 A0A1B0GVL5 298 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 SKIP12755 728 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 IDEP14735 1019 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 DNAJB2P25686 324 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 AXLP30530 894 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 NPTX2P47972 431 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 GIT2Q14161 759 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 DSC3Q14574 896 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-219ENST00000567399 LRRC15Q8TF66 581 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 LINC01599Q8WXQ3 324 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 DDX12PQ92771 950 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 CPB2Q96IY4 423 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 KIFC3Q9BVG8 833 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-219ENST00000567399 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 PARVGQ9HBI0 331 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 AGPAT5Q9NUQ2 364 aa16.72■□□□□ 0.27
COMMD4-219ENST00000567399 H0YCG3 227 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 SLC16A4O15374 487 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 PRKCBP05771 671 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 MYOGP15173 224 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 PFKFB1P16118 471 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 STRN3Q13033 797 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 PRPF4BQ13523 1007 aaKnown RBP16.71■□□□□ 0.27
COMMD4-219ENST00000567399 NAALADL2Q58DX5 795 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 ZNF697Q5TEC3 545 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 CDCA2Q69YH5 1023 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-219ENST00000567399 DAW1Q8N136 415 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 FSIP1Q8NA03 581 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 TET1Q8NFU7 2136 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 STAMQ92783 540 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 TNMDQ9H2S6 317 aa16.71■□□□□ 0.27
COMMD4-219ENST00000567399 PHLPP2Q6ZVD8 1323 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 CEP290O15078 2479 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 MYMKA6NI61 221 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 C9IYK1 514 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 TSPAN1O60635 241 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 SYKP43405 635 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
COMMD4-219ENST00000567399 MAPK7Q13164 816 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 ABI1Q8IZP0 508 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 MRPS27Q92552 414 aaKnown RBP16.7■□□□□ 0.26
COMMD4-219ENST00000567399 PRIMPOLQ96LW4 560 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 MAGEF1Q9HAY2 307 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 TMEM161AQ9NX61 479 aa16.7■□□□□ 0.26
COMMD4-219ENST00000567399 A0A0U1RQF3 1178 aa16.69■□□□□ 0.26
COMMD4-219ENST00000567399 A0A1W2PQ27 194 aa16.69■□□□□ 0.26
COMMD4-219ENST00000567399 A0A1W2PQ64 194 aa16.69■□□□□ 0.26
COMMD4-219ENST00000567399 A0A1W2PQD8 194 aa16.69■□□□□ 0.26
COMMD4-219ENST00000567399 HOXA2O43364 376 aa16.69■□□□□ 0.26
COMMD4-219ENST00000567399 TRAK2O60296 914 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms