RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ARIH1Q9Y4X5 557 aaPredicted RBP18.5■□□□□ 0.55
CLN6-208ENST00000567060 CDY2AQ9Y6F7 541 aa18.5■□□□□ 0.55
CLN6-208ENST00000567060 A0A087X0B3 334 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 A0A1B0GVL5 298 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 GTPBP6O43824 516 aaPredicted RBP18.49■□□□□ 0.55
CLN6-208ENST00000567060 LPXNO60711 386 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 GPR32O75388 356 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 CXCL10P02778 98 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 SSBP05455 408 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLN6-208ENST00000567060 SLFN14P0C7P3 912 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 MCM6Q14566 821 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 GPBP1Q86WP2 473 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 HERC6Q8IVU3 1022 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 PRPF31Q8WWY3 499 aaKnown RBP18.49■□□□□ 0.55
CLN6-208ENST00000567060 ARNTL2Q8WYA1 636 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 APBB2Q92870 758 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 TMEM143Q96AN5 459 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 DHX58Q96C10 678 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 IFT74Q96LB3 600 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 GCOM2Q9BZD3 368 aaPredicted RBP18.49■□□□□ 0.55
CLN6-208ENST00000567060 LARSQ9P2J5 1176 aaKnown RBP18.49■□□□□ 0.55
CLN6-208ENST00000567060 TET1Q8NFU7 2136 aa18.49■□□□□ 0.55
CLN6-208ENST00000567060 A0A087WWV3 80 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 CHRNA1P02708 482 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 VTNP04004 478 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 NAMPTP43490 491 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 NLRP11P59045 1033 aaKnown RBP18.48■□□□□ 0.55
CLN6-208ENST00000567060 FAM160A1Q05DH4 1040 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 LAMTOR4Q0VGL1 99 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 FAM102BQ5T8I3 360 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 SRGAP1Q7Z6B7 1085 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 RHPN2Q8IUC4 686 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 KCNN1Q92952 543 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 ZBTB10Q96DT7 871 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 TIGD1Q96MW7 591 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 SLC9A7Q96T83 725 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 RUSC1Q9BVN2 902 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 POLR3FQ9H1D9 316 aaPredicted RBP18.48■□□□□ 0.55
CLN6-208ENST00000567060 C2orf40Q9H1Z8 148 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 ADAMTS10Q9H324 1103 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 C11orf16Q9NQ32 467 aa18.48■□□□□ 0.55
CLN6-208ENST00000567060 H0YCG3 227 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 EFCAB14O75071 495 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 KRT18P05783 430 aaKnown RBP18.47■□□□□ 0.55
CLN6-208ENST00000567060 ACTN1P12814 892 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
CLN6-208ENST00000567060 PHKA2P46019 1235 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 NDUFA8P51970 172 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 ZNF131P52739 623 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
CLN6-208ENST00000567060 DRP2Q13474 957 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 GPNMBQ14956 572 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 FBXO47Q5MNV8 452 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 TSHZ1Q6ZSZ6 1077 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 ELOA2Q8IYF1 753 aaPredicted RBP18.47■□□□□ 0.55
CLN6-208ENST00000567060 LRRC15Q8TF66 581 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 NLRP7Q8WX94 980 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 HLA-CQ95604 372 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 SCLT1Q96NL6 688 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 NTPCRQ9BSD7 190 aaKnown RBP18.47■□□□□ 0.55
CLN6-208ENST00000567060 PANK2Q9BZ23 570 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 SEL1LQ9UBV2 794 aa18.47■□□□□ 0.55
CLN6-208ENST00000567060 BRWD1Q9NSI6 2320 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 GPR182O15218 404 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 ACTN4O43707 911 aaKnown RBP18.46■□□□□ 0.55
CLN6-208ENST00000567060 HIP1RO75146 1068 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
CLN6-208ENST00000567060 ZNF202O95125 648 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 CTSHP09668 335 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 DARSP14868 501 aaKnown RBP18.46■□□□□ 0.55
CLN6-208ENST00000567060 GLRA2P23416 452 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 EFNA5P52803 228 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 SMTNP53814 917 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 PTENP60484 403 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 ARSHQ5FYA8 562 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 SPIRE2Q8WWL2 714 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 DDX12PQ92771 950 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 C7orf25Q9BPX7 421 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 FTHL17Q9BXU8 183 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 PARVGQ9HBI0 331 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 CD320Q9NPF0 282 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 HOOK1Q9UJC3 728 aaKnown RBP18.46■□□□□ 0.55
CLN6-208ENST00000567060 MYH11P35749 1972 aa18.46■□□□□ 0.55
CLN6-208ENST00000567060 RBAK-RBAKDNI3L0D1 243 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 FAM13AO94988 1023 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 MAPTP10636 758 aaKnown RBP18.45■□□□□ 0.54
CLN6-208ENST00000567060 PLS3P13797 630 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 GAP43P17677 238 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 SFPQP23246 707 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLN6-208ENST00000567060 MAPK7Q13164 816 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 GIT2Q14161 759 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 KIZQ2M2Z5 673 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 PLEKHG4Q58EX7 1191 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 TMEM31Q5JXX7 168 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 CDCA2Q69YH5 1023 aaPredicted RBP18.45■□□□□ 0.54
CLN6-208ENST00000567060 CNKSR3Q6P9H4 555 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 ZBTB8OSQ8IWT0 167 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 FMR1NBQ8N0W7 255 aaPredicted RBP18.45■□□□□ 0.54
CLN6-208ENST00000567060 RNF149Q8NC42 400 aa18.45■□□□□ 0.54
CLN6-208ENST00000567060 CNNM3Q8NE01 707 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms