RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 POP1Q99575 1024 aaKnown RBP15.92■□□□□ 0.14
COMMD4-216ENST00000567023 TTC12Q9H892 705 aaPredicted RBP15.92■□□□□ 0.14
COMMD4-216ENST00000567023 AGPAT5Q9NUQ2 364 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 FAM105AQ9NUU6 356 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 SPG21Q9NZD8 308 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 LIMCH1Q9UPQ0 1083 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 PIN4Q9Y237 131 aaKnown RBP15.92■□□□□ 0.14
COMMD4-216ENST00000567023 CARNS1A5YM72 827 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 PER2O15055 1255 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 ZBTB39O15060 712 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 NEMFO60524 1076 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 RAB27AP51159 221 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 LAMTOR4Q0VGL1 99 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 TRIM29Q14134 588 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 CTTNQ14247 550 aaKnown RBP15.91■□□□□ 0.14
COMMD4-216ENST00000567023 PCBP1Q15365 356 aaKnown RBP eCLIP15.91■□□□□ 0.14
COMMD4-216ENST00000567023 CALCRLQ16602 461 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 CATSPER4Q7RTX7 472 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 SLC39A11Q8N1S5 342 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 TMEM143Q96AN5 459 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 TCF25Q9BQ70 676 aa15.91■□□□□ 0.14
COMMD4-216ENST00000567023 EIF2AK1Q9BQI3 630 aaKnown RBP15.91■□□□□ 0.14
COMMD4-216ENST00000567023 ARIH1Q9Y4X5 557 aaPredicted RBP15.91■□□□□ 0.14
COMMD4-216ENST00000567023 WNT7AO00755 349 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 SRGAP2CP0DJJ0 459 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 HOXA11P31270 313 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-216ENST00000567023 PBX3P40426 434 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 ALDH7A1P49419 539 aaKnown RBP15.9■□□□□ 0.14
COMMD4-216ENST00000567023 BCAR1P56945 870 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 CYP4A11Q02928 519 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 POU5F1BQ06416 359 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 EMC2Q15006 297 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 XKR9Q5GH70 373 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 MRPL10Q7Z7H8 261 aaKnown RBP15.9■□□□□ 0.14
COMMD4-216ENST00000567023 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 TPH2Q8IWU9 490 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 VN1R2Q8NFZ6 395 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 LLPHQ9BRT6 129 aaKnown RBP15.9■□□□□ 0.14
COMMD4-216ENST00000567023 MINDY3Q9H8M7 445 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 ANKEF1Q9NU02 776 aa15.9■□□□□ 0.14
COMMD4-216ENST00000567023 BARX2Q9UMQ3 279 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-216ENST00000567023 DCXO43602 365 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 OFD1O75665 1012 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.13
COMMD4-216ENST00000567023 MXD4Q14582 209 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-216ENST00000567023 GLB1LQ6UWU2 654 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-216ENST00000567023 MRPL43Q8N983 215 aaKnown RBP15.89■□□□□ 0.13
COMMD4-216ENST00000567023 PGBD4Q96DM1 585 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 MTRQ99707 1265 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 XPNPEP1Q9NQW7 623 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 RAPGEFL1Q9UHV5 662 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 PCDHB2Q9Y5E7 798 aa15.89■□□□□ 0.13
COMMD4-216ENST00000567023 MEIS3P2A8K0S8 358 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 HIDE1A8MVS5 230 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 PRR33A8MZF0 331 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 DGAT1O75907 488 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 TXKP42681 527 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 SAFBQ15424 915 aaKnown RBP eCLIP15.88■□□□□ 0.13
COMMD4-216ENST00000567023 NOMO2Q5JPE7 1267 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 PLPP4Q5VZY2 271 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 TMC7Q7Z402 723 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 RNF149Q8NC42 400 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 SUSD6Q92537 303 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 LPPQ93052 612 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 KIF2CQ99661 725 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 ENTPD7Q9NQZ7 604 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 TBC1D13Q9NVG8 400 aa15.88■□□□□ 0.13
COMMD4-216ENST00000567023 SRGAP2BP0DMP2 458 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 AXLP30530 894 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 ARL2P36404 184 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 RARRES1P49788 294 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 PTENP60484 403 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 RBM10P98175 930 aaKnown RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 ORC2Q13416 577 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 HERC4Q5GLZ8 1057 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 AGMOQ6ZNB7 445 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 ZSCAN31Q96LW9 406 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 NFKBIZQ9BYH8 718 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 S1PR5Q9H228 398 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 TMEM60Q9H2L4 133 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 FOXP1Q9H334 677 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 NRDE2Q9H7Z3 1164 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 USP15Q9Y4E8 981 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-216ENST00000567023 IRAK3Q9Y616 596 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
COMMD4-216ENST00000567023 FAM86C2PA6NEL3 165 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 LOC730098B7Z3J9 87 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 NT5C1B-RDH14C9J2C7 533 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 ZC3H11AO75152 810 aaKnown RBP eCLIP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 GALTP07902 379 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 SPATA31C1P0DKV0 1188 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 HOXB8P17481 243 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 HMGN5P82970 282 aaKnown RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 BMS1Q14692 1282 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms