RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 DMP1Q13316 513 aaPredicted RBP28.88■■■□□ 2.21
NME3-209ENST00000566600 NAALADL2Q58DX5 795 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 DAW1Q8N136 415 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 IQUBQ8NA54 791 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 RAD9AQ99638 391 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 PBX4Q9BYU1 374 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 POLD4Q9HCU8 107 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 TSHZ2Q9NRE2 1034 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 AGPAT5Q9NUQ2 364 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 PIN4Q9Y237 131 aaKnown RBP28.88■■■□□ 2.21
NME3-209ENST00000566600 A0A087X0B3 334 aa28.87■■■□□ 2.21
NME3-209ENST00000566600 TLL1O43897 1013 aa28.87■■■□□ 2.21
NME3-209ENST00000566600 CMA1P23946 247 aa28.87■■■□□ 2.21
NME3-209ENST00000566600 SARSP49591 514 aaKnown RBP28.87■■■□□ 2.21
NME3-209ENST00000566600 RAD51AP2Q09MP3 1159 aa28.87■■■□□ 2.21
NME3-209ENST00000566600 NPAS4Q8IUM7 802 aa28.87■■■□□ 2.21
NME3-209ENST00000566600 PTPRSQ13332 1948 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 UPP2O95045 317 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 PLS3P13797 630 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 DNAJB2P25686 324 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 AXLP30530 894 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 RABGGTBP53611 331 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 PEX3P56589 373 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 LRCH3Q96II8 777 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 PRIMPOLQ96LW4 560 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 REEP2Q9BRK0 252 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 LRRC27Q9C0I9 530 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 PRMT7Q9NVM4 692 aaPredicted RBP28.86■■■□□ 2.21
NME3-209ENST00000566600 LARSQ9P2J5 1176 aaKnown RBP28.86■■■□□ 2.21
NME3-209ENST00000566600 LRFN2Q9ULH4 789 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 INSL6Q9Y581 213 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 PHLPP2Q6ZVD8 1323 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 TTC3P53804 2025 aa28.86■■■□□ 2.21
NME3-209ENST00000566600 CCDC169A6NNP5 214 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 C9IYK1 514 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 NPTX2P47972 431 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 SMTNP53814 917 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 E2F4Q16254 413 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 FAM117BQ6P1L5 589 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 TMCO2Q7Z6W1 182 aaPredicted RBP28.85■■■□□ 2.21
NME3-209ENST00000566600 TRAIPQ9BWF2 469 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 PCDHB7Q9Y5E2 793 aa28.85■■■□□ 2.21
NME3-209ENST00000566600 TMEM265A0A087WTH1 108 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 NPHP3-ACAD11A0A0J9YXS1 232 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 TBCAO75347 108 aaKnown RBP28.84■■■□□ 2.21
NME3-209ENST00000566600 FAM13AO94988 1023 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 SKIP12755 728 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 PBX2P40425 430 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 FAM189BP81408 668 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 GIT2Q14161 759 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 MAPK6Q16659 721 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 FAM187BQ17R55 369 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 TWF2Q6IBS0 349 aaKnown RBP28.84■■■□□ 2.21
NME3-209ENST00000566600 PPP4R3CPQ6ZMV5 832 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 SPIRE2Q8WWL2 714 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 DHX58Q96C10 678 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 TIFAQ96CG3 184 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 CCDC51Q96ER9 411 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 NTPCRQ9BSD7 190 aaKnown RBP28.84■■■□□ 2.21
NME3-209ENST00000566600 FZD8Q9H461 694 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 ELAC1Q9H777 363 aaKnown RBP28.84■■■□□ 2.21
NME3-209ENST00000566600 MAGEF1Q9HAY2 307 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 KMT5AQ9NQR1 393 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 KCNH3Q9ULD8 1083 aa28.84■■■□□ 2.21
NME3-209ENST00000566600 LAMA2P24043 3122 aaKnown RBP28.84■■■□□ 2.21
NME3-209ENST00000566600 LAMA3Q16787 3333 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 A0A1W2PQ27 194 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 A0A1W2PQ64 194 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 A0A1W2PQD8 194 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 SFI1A8K8P3 1242 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 POLR2DO15514 142 aaKnown RBP28.83■■■□□ 2.21
NME3-209ENST00000566600 TSPAN1O60635 241 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 HTRA4P83105 476 aaPredicted RBP28.83■■■□□ 2.21
NME3-209ENST00000566600 AMPD3Q01432 767 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 IPO9Q96P70 1041 aaKnown RBP28.83■■■□□ 2.21
NME3-209ENST00000566600 YME1L1Q96TA2 773 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 TNMDQ9H2S6 317 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 PARVGQ9HBI0 331 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 GDPD2Q9HCC8 539 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 TMEM161AQ9NX61 479 aa28.83■■■□□ 2.21
NME3-209ENST00000566600 A0A0U1RQF3 1178 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 H0YCG3 227 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 SCP2P22307 547 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 HOXA11P31270 313 aaPredicted RBP28.82■■■□□ 2.2
NME3-209ENST00000566600 RAB27AP51159 221 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 ZNF131P52739 623 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 CACNB1Q02641 598 aaPredicted RBP28.82■■■□□ 2.2
NME3-209ENST00000566600 AMHR2Q16671 573 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 NOTUMQ6P988 496 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 CRIPAKQ8N1N5 446 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 SLC28A3Q9HAS3 691 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 YBX2Q9Y2T7 364 aaKnown RBP28.82■■■□□ 2.2
NME3-209ENST00000566600 GBF1Q92538 1859 aa28.82■■■□□ 2.2
NME3-209ENST00000566600 MYH11P35749 1972 aa28.81■■■□□ 2.2
NME3-209ENST00000566600 K7ERI5 159 aa28.81■■■□□ 2.2
NME3-209ENST00000566600 CSPP1Q1MSJ5 1256 aa28.81■■■□□ 2.2
NME3-209ENST00000566600 MYCT1Q8N699 235 aa28.81■■■□□ 2.2
NME3-209ENST00000566600 DDX12PQ92771 950 aa28.81■■■□□ 2.2
NME3-209ENST00000566600 CCDC113Q9H0I3 377 aa28.81■■■□□ 2.2
NME3-209ENST00000566600 TMEM134Q9H6X4 195 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms