RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TMEM143Q96AN5 459 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 EIF2AK1Q9BQI3 630 aaKnown RBP22.52■■□□□ 1.2
CLN6-207ENST00000566347 TTC12Q9H892 705 aaPredicted RBP22.52■■□□□ 1.2
CLN6-207ENST00000566347 NGRNQ9NPE2 291 aaKnown RBP22.52■■□□□ 1.2
CLN6-207ENST00000566347 ENTPD7Q9NQZ7 604 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 AGPAT5Q9NUQ2 364 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 FAM105AQ9NUU6 356 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 CLEC1BQ9P126 229 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 ARID2Q68CP9 1835 aa22.52■■□□□ 1.2
CLN6-207ENST00000566347 GPR37L1O60883 481 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 ZNF623O75123 536 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 SLITRK3O94933 977 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 LYPLA2O95372 231 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 GLP2RO95838 553 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 SRGAP2CP0DJJ0 459 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 SRGAP2BP0DMP2 458 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 ST3GAL1Q11201 340 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 DUSP6Q16828 381 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 GLB1LQ6UWU2 654 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 SMRP1Q8NCR6 262 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 MTRQ99707 1265 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 HSD17B14Q9BPX1 270 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 TCF25Q9BQ70 676 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 LLPHQ9BRT6 129 aaKnown RBP22.51■■□□□ 1.19
CLN6-207ENST00000566347 LRFN3Q9BTN0 628 aa22.51■■□□□ 1.19
CLN6-207ENST00000566347 C5orf42Q9H799 3197 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 PER2O15055 1255 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 PBX3P40426 434 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 ALDH7A1P49419 539 aaKnown RBP22.5■■□□□ 1.19
CLN6-207ENST00000566347 PLPP4Q5VZY2 271 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 FERMT3Q86UX7 667 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 SLC39A11Q8N1S5 342 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 PGBD4Q96DM1 585 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 BMP2KQ9NSY1 1161 aaPredicted RBP22.5■■□□□ 1.19
CLN6-207ENST00000566347 ANKEF1Q9NU02 776 aa22.5■■□□□ 1.19
CLN6-207ENST00000566347 BARX2Q9UMQ3 279 aaPredicted RBP22.5■■□□□ 1.19
CLN6-207ENST00000566347 TXKP42681 527 aa22.49■■□□□ 1.19
CLN6-207ENST00000566347 MXD4Q14582 209 aaPredicted RBP22.49■■□□□ 1.19
CLN6-207ENST00000566347 PCBP1Q15365 356 aaKnown RBP eCLIP22.49■■□□□ 1.19
CLN6-207ENST00000566347 RNF149Q8NC42 400 aa22.49■■□□□ 1.19
CLN6-207ENST00000566347 LPPQ93052 612 aa22.49■■□□□ 1.19
CLN6-207ENST00000566347 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
CLN6-207ENST00000566347 MTMR9Q96QG7 549 aa22.49■■□□□ 1.19
CLN6-207ENST00000566347 ZBTB39O15060 712 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 DCXO43602 365 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 BCAR1P56945 870 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 BMS1Q14692 1282 aaKnown RBP22.48■■□□□ 1.19
CLN6-207ENST00000566347 NOMO2Q5JPE7 1267 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 TMC7Q7Z402 723 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 CCDC83Q8IWF9 413 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 TMEM169Q96HH4 297 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 C8orf76Q96K31 380 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 ZSCAN31Q96LW9 406 aaPredicted RBP22.48■■□□□ 1.19
CLN6-207ENST00000566347 PCDHB2Q9Y5E7 798 aa22.48■■□□□ 1.19
CLN6-207ENST00000566347 WNT7AO00755 349 aa22.47■■□□□ 1.19
CLN6-207ENST00000566347 DGAT1O75907 488 aa22.47■■□□□ 1.19
CLN6-207ENST00000566347 HMGN5P82970 282 aaKnown RBP22.47■■□□□ 1.19
CLN6-207ENST00000566347 TFDP1Q14186 410 aa22.47■■□□□ 1.19
CLN6-207ENST00000566347 SMC1AQ14683 1233 aaKnown RBP22.47■■□□□ 1.19
CLN6-207ENST00000566347 TMEM184AQ6ZMB5 413 aa22.47■■□□□ 1.19
CLN6-207ENST00000566347 MINDY3Q9H8M7 445 aa22.47■■□□□ 1.19
CLN6-207ENST00000566347 C11orf16Q9NQ32 467 aa22.47■■□□□ 1.19
CLN6-207ENST00000566347 ZC3H11AO75152 810 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLN6-207ENST00000566347 OFD1O75665 1012 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 ERLIN2O94905 339 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 MCM7P33993 719 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 GUCY1B3Q02153 619 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 RNASELQ05823 741 aaKnown RBP22.46■■□□□ 1.19
CLN6-207ENST00000566347 POU5F1BQ06416 359 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 ORC2Q13416 577 aaPredicted RBP22.46■■□□□ 1.19
CLN6-207ENST00000566347 LONRF3Q496Y0 759 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 VN1R2Q8NFZ6 395 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 URGCPQ8TCY9 931 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 FOXP1Q9H334 677 aaPredicted RBP22.46■■□□□ 1.19
CLN6-207ENST00000566347 XPNPEP1Q9NQW7 623 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 SH2B1Q9NRF2 756 aaPredicted RBP22.46■■□□□ 1.19
CLN6-207ENST00000566347 TBC1D13Q9NVG8 400 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 INPP5FQ9Y2H2 1132 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 CNTNAP2Q9UHC6 1331 aa22.46■■□□□ 1.19
CLN6-207ENST00000566347 FAM86C2PA6NEL3 165 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 HIDE1A8MVS5 230 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 XRCC6P12956 609 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLN6-207ENST00000566347 ATP2B1P20020 1258 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 AXLP30530 894 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 HOXA11P31270 313 aaPredicted RBP22.45■■□□□ 1.18
CLN6-207ENST00000566347 PTENP60484 403 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 NCBP1Q09161 790 aaKnown RBP22.45■■□□□ 1.18
CLN6-207ENST00000566347 KCNC3Q14003 757 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 MRPL10Q7Z7H8 261 aaKnown RBP22.45■■□□□ 1.18
CLN6-207ENST00000566347 MRPL43Q8N983 215 aaKnown RBP22.45■■□□□ 1.18
CLN6-207ENST00000566347 TMEM60Q9H2L4 133 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 RAPGEFL1Q9UHV5 662 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 HCN4Q9Y3Q4 1203 aa22.45■■□□□ 1.18
CLN6-207ENST00000566347 USP15Q9Y4E8 981 aaPredicted RBP22.45■■□□□ 1.18
CLN6-207ENST00000566347 POTEMA6NI47 508 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 MEIS3P2A8K0S8 358 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 PRR33A8MZF0 331 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 NT5C1B-RDH14C9J2C7 533 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 RARRES1P49788 294 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 RBM10P98175 930 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms