RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 OSBPL6Q9BZF3 934 aa3.66□□□□□ -1.82
SMG1-212ENST00000566328 EPC1Q9H2F5 836 aa3.66□□□□□ -1.82
SMG1-212ENST00000566328 PCIF1Q9H4Z3 704 aa3.66□□□□□ -1.82
SMG1-212ENST00000566328 EIF2B4Q9UI10 523 aaKnown RBP3.66□□□□□ -1.82
SMG1-212ENST00000566328 DNAI1Q9UI46 699 aa3.66□□□□□ -1.82
SMG1-212ENST00000566328 TCRBV16S1A1N1A0A5B0 115 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 KIAA0355O15063 1070 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 KCNQ2O43526 872 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 KRT37O76014 449 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 FSBPO95073 299 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 HK1P19367 917 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 NR4A1P22736 598 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 AVPR1BP47901 424 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 ZNF174Q15697 407 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 ERCC6LQ2NKX8 1250 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 TIGD7Q6NT04 549 aaPredicted RBP3.65□□□□□ -1.83
SMG1-212ENST00000566328 LRP10Q7Z4F1 713 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 FAM83AQ86UY5 434 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 NELL1Q92832 810 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 MYEOVQ96EZ4 313 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 SCLYQ96I15 445 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 BBC3Q96PG8 261 aaPredicted RBP3.65□□□□□ -1.83
SMG1-212ENST00000566328 CPPED1Q9BRF8 314 aaPredicted RBP3.65□□□□□ -1.83
SMG1-212ENST00000566328 SLC46A2Q9BY10 475 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 MRPL4Q9BYD3 311 aaKnown RBP3.65□□□□□ -1.83
SMG1-212ENST00000566328 HAPLN2Q9GZV7 340 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 COX11Q9Y6N1 276 aa3.65□□□□□ -1.83
SMG1-212ENST00000566328 GAGE12BA1L429 117 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 GAGE12HA6NDE8 117 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 HOXA3O43365 443 aaPredicted RBP3.64□□□□□ -1.83
SMG1-212ENST00000566328 ADCY1Q08828 1119 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 LCORLQ8N3X6 602 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 BEND2Q8NDZ0 799 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 DCLRE1CQ96SD1 692 aaKnown RBP3.64□□□□□ -1.83
SMG1-212ENST00000566328 KCNH6Q9H252 994 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 SERHL2Q9H4I8 314 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 CLCA2Q9UQC9 943 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 HDAC5Q9UQL6 1122 aa3.64□□□□□ -1.83
SMG1-212ENST00000566328 H7C1D1 291 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 RNASET2O00584 256 aaKnown RBP3.63□□□□□ -1.83
SMG1-212ENST00000566328 HNRNPLP14866 589 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMG1-212ENST00000566328 KCNA6P17658 529 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 RANGAP1P46060 587 aaPredicted RBP3.63□□□□□ -1.83
SMG1-212ENST00000566328 ADCY2Q08462 1091 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 EPHA7Q15375 998 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 ABHD17CQ6PCB6 329 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 Q6YL49 198 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 RD3Q7Z3Z2 195 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 BRAPQ7Z569 592 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 CHST14Q8NCH0 376 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 ZSWIM2Q8NEG5 633 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 NTN5Q8WTR8 489 aaPredicted RBP3.63□□□□□ -1.83
SMG1-212ENST00000566328 SYNPO2LQ9H987 977 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 CABP5Q9NP86 173 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 INSL6Q9Y581 213 aa3.63□□□□□ -1.83
SMG1-212ENST00000566328 TNPO3Q9Y5L0 923 aaKnown RBP3.63□□□□□ -1.83
SMG1-212ENST00000566328 A0A0A6YYJ9 748 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 CENPVL1A0A0U1RR11 272 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 DNAJC6O75061 913 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 ZNF37AP17032 561 aaPredicted RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 ZEB1P37275 1124 aaPredicted RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 MECP2P51608 486 aaKnown RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 WNT3AP56704 352 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 BLOC1S1P78537 153 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 VPS72Q15906 364 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 COLEC12Q5KU26 742 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 HDGFL2Q7Z4V5 671 aaPredicted RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 CXorf67Q86X51 503 aaPredicted RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 PHYKPLQ8IUZ5 450 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 OR5M3Q8NGP4 307 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 CAVIN3Q969G5 261 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 HIST1H2AHQ96KK5 128 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 COQ10AQ96MF6 247 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 HIST1H2AJQ99878 128 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 NDC1Q9BTX1 674 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 HIRIP3Q9BW71 556 aaPredicted RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 PITHD1Q9GZP4 211 aaPredicted RBP3.62□□□□□ -1.83
SMG1-212ENST00000566328 MTG2Q9H4K7 406 aa3.62□□□□□ -1.83
SMG1-212ENST00000566328 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMG1-212ENST00000566328 PTPDC1A2A3K4 754 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 TMEM200CA6NKL6 621 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 DIRC3C9JPN6 131 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 INO80B-WBP1J3KQ70 363 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 M0R2C6 588 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 STC2O76061 302 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 HLA-DOAP06340 250 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 ATP2B1P20020 1258 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 ELLP55199 621 aaPredicted RBP3.61□□□□□ -1.83
SMG1-212ENST00000566328 MYBPC3Q14896 1274 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 DDB1Q16531 1140 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 ZCCHC8Q6NZY4 707 aaKnown RBP3.61□□□□□ -1.83
SMG1-212ENST00000566328 CCDC62Q6P9F0 684 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 KANSL1Q7Z3B3 1105 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 GDF7Q7Z4P5 450 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 FGD2Q7Z6J4 655 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 ARHGEF19Q8IW93 802 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 ZZZ3Q8IYH5 903 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 UNC5BQ8IZJ1 945 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 C7orf31Q8N865 590 aa3.61□□□□□ -1.83
SMG1-212ENST00000566328 KIAA1958Q8N8K9 716 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms