RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 MGRN1O60291 552 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
TCF4-232ENST00000566286 TRIM37O94972 964 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 JAM2P57087 298 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 PTENP60484 403 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 KNOP1Q1ED39 458 aaKnown RBP11.87□□□□□ -0.51
TCF4-232ENST00000566286 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 ZNF804AQ7Z570 1209 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 CEP57Q86XR8 500 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 RGL4Q8IZJ4 473 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 PGM2Q96G03 612 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 PLCD4Q9BRC7 762 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 DPH5Q9H2P9 285 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 TPX2Q9ULW0 747 aaKnown RBP11.87□□□□□ -0.51
TCF4-232ENST00000566286 ATP8A1Q9Y2Q0 1164 aa11.87□□□□□ -0.51
TCF4-232ENST00000566286 GPR75-ASB3A0A0A6YYF3 556 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 GTPBP10A4D1E9 387 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 FAM187AA6NFU0 413 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 CCT8L1PA6NM43 557 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 CCDC169A6NNP5 214 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 DCDC2CA8MYV0 355 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 POTECB2RU33 542 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 ASAP2O43150 1006 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 FGGP02679 453 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 GYS1P13807 737 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 RPL13P26373 211 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 HSD3B2P26439 372 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 DHX34Q14147 1143 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 ITIH4Q14624 930 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 EPHA7Q15375 998 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 SPRED3Q2MJR0 410 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 N4BP2L2Q92802 583 aaPredicted RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 SCLT1Q96NL6 688 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 CELF4Q9BZC1 486 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 GLT8D2Q9H1C3 349 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 CARD9Q9H257 536 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 RNF19AQ9NV58 838 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 NCANO14594 1321 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 NPHP3-ACAD11A0A0J9YXS1 232 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 LMNB1P20700 586 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 GBP1P32455 592 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 STAT1P42224 750 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 SLC12A3P55017 1021 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 DR1Q01658 176 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 GRAPQ13588 217 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 UBE2SQ16763 222 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 SWI5Q1ZZU3 235 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 PRR5LQ6MZQ0 368 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 RPUSD2Q8IZ73 545 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 GRAPLQ8TC17 118 aaPredicted RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 RFFLQ8WZ73 363 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 ERP44Q9BS26 406 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 IRF2BPLQ9H1B7 796 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 PABPC3Q9H361 631 aaKnown RBP11.86□□□□□ -0.51
TCF4-232ENST00000566286 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 RASAL2Q9UJF2 1139 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 SUFUQ9UMX1 484 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
TCF4-232ENST00000566286 F8W031 263 aaPredicted RBP11.85□□□□□ -0.51
TCF4-232ENST00000566286 DDX3XO00571 662 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCF4-232ENST00000566286 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 CAND2O75155 1236 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 TMEM253P0C7T8 217 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 MMP13P45452 471 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 DRG2P55039 364 aaKnown RBP11.85□□□□□ -0.51
TCF4-232ENST00000566286 DCAF17Q5H9S7 520 aaPredicted RBP11.85□□□□□ -0.51
TCF4-232ENST00000566286 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 DUPD1Q68J44 220 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 SLC51AQ86UW1 340 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 FAM228AQ86W67 206 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 U2AF1L4Q8WU68 220 aaKnown RBP11.85□□□□□ -0.51
TCF4-232ENST00000566286 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
TCF4-232ENST00000566286 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
TCF4-232ENST00000566286 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 SIX2Q9NPC8 291 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 GCNT4Q9P109 453 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 DAAM1Q9Y4D1 1078 aa11.85□□□□□ -0.51
TCF4-232ENST00000566286 BACH1O14867 736 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 MMEP08473 750 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 PMS2P54278 862 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 GALCP54803 685 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 GRIK5Q16478 980 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
TCF4-232ENST00000566286 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms