RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 RAB27AP51159 221 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 PPP2R5AQ15172 486 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 HYIQ5T013 277 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 FOXD4L5Q5VV16 416 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-210ENST00000565666 KCNK18Q7Z418 384 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 IFNLR1Q8IU57 520 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-210ENST00000565666 ZBTB8OSQ8IWT0 167 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 FOXD4L4Q8WXT5 416 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-210ENST00000565666 CLP1Q92989 425 aaKnown RBP20.72■□□□□ 0.91
CMTM3-210ENST00000565666 IFT74Q96LB3 600 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 PNMA5Q96PV4 448 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 NFKBIZQ9BYH8 718 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 TMEM117Q9H0C3 514 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 FAM105AQ9NUU6 356 aa20.72■□□□□ 0.91
CMTM3-210ENST00000565666 H3BNC9 293 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 RB1P06400 928 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 POU3F3P20264 500 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-210ENST00000565666 AXLP30530 894 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 MBTD1Q05BQ5 628 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 PTPAQ15257 358 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 KCTD17Q8N5Z5 321 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 DEPTORQ8TB45 409 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 KIFAP3Q92845 792 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 USP28Q96RU2 1077 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 C11orf84Q9BUA3 381 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-210ENST00000565666 TRAIPQ9BWF2 469 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 POLD4Q9HCU8 107 aa20.71■□□□□ 0.91
CMTM3-210ENST00000565666 C5orf67F2Z3F1 127 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 SLC26A4O43511 780 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 TSPAN1O60635 241 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 LINC00271P0C7V0 271 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 NAMPTP43490 491 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 GRIN1Q05586 938 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 LONRF3Q496Y0 759 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 ZNF598Q86UK7 904 aaKnown RBP20.7■□□□□ 0.9
CMTM3-210ENST00000565666 HELQQ8TDG4 1101 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 BSNDQ8WZ55 320 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 CPB2Q96IY4 423 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 ZNF396Q96N95 335 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-210ENST00000565666 C2orf40Q9H1Z8 148 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 AAASQ9NRG9 546 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 LMCD1Q9NZU5 365 aa20.7■□□□□ 0.9
CMTM3-210ENST00000565666 ATF7P17544 494 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-210ENST00000565666 PTPROQ16827 1216 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 TMEM119Q4V9L6 283 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 RINT1Q6NUQ1 792 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 NOTUMQ6P988 496 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 SLC17A8Q8NDX2 589 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 LPPQ93052 612 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 PGBD4Q96DM1 585 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 CASD1Q96PB1 797 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 RUSC1Q9BVN2 902 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 PLVAPQ9BX97 442 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 CSRNP2Q9H175 543 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 RNF19AQ9NV58 838 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 TYW1Q9NV66 732 aaKnown RBP20.69■□□□□ 0.9
CMTM3-210ENST00000565666 FBXO2Q9UK22 296 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-210ENST00000565666 PCDHB2Q9Y5E7 798 aa20.69■□□□□ 0.9
CMTM3-210ENST00000565666 HIP1RO75146 1068 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 ZSCAN22P10073 491 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 LIG1P18858 919 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 HOXA11P31270 313 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 KARSQ15046 597 aaKnown RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 STK38Q15208 465 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 SKIV2LQ15477 1246 aaKnown RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 TMEM132AQ24JP5 1023 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 CLLU1OSQ5K130 101 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 CDCA2Q69YH5 1023 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 LRRC43Q8N309 656 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 SYT2Q8N9I0 419 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 CCDC51Q96ER9 411 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 DRC1Q96MC2 740 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 PRMT7Q9NVM4 692 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 PCDHB12Q9Y5F1 795 aa20.68■□□□□ 0.9
CMTM3-210ENST00000565666 SRPRBQ9Y5M8 271 aaKnown RBP20.68■□□□□ 0.9
CMTM3-210ENST00000565666 CHD7Q9P2D1 2997 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 B4GALT5O43286 388 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 ZNF623O75123 536 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 F13A1P00488 732 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 PLA2G4BP0C869 781 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 ARF4P18085 180 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-210ENST00000565666 SLC39A14Q15043 492 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 AMHR2Q16671 573 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 SPECC1Q5M775 1068 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 GLB1LQ6UWU2 654 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 C1orf186Q6ZWK4 172 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 P2RX5Q93086 422 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 MRPL38Q96DV4 380 aaKnown RBP20.67■□□□□ 0.9
CMTM3-210ENST00000565666 TIPINQ9BVW5 301 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 MRPL9Q9BYD2 267 aaKnown RBP20.67■□□□□ 0.9
CMTM3-210ENST00000565666 TRIM6Q9C030 488 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-210ENST00000565666 HCSTQ9UBK5 93 aa20.67■□□□□ 0.9
CMTM3-210ENST00000565666 CCDC169A6NNP5 214 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 PRKCBP05771 671 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 LAG3P18627 525 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 PLCG1P19174 1290 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 TXLNAP40222 546 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 RAD51AP2Q09MP3 1159 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 DHX8Q14562 1220 aaKnown RBP20.66■□□□□ 0.9
CMTM3-210ENST00000565666 MAPK6Q16659 721 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms