RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 GOLGA5Q8TBA6 731 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 CEP63Q96MT8 703 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 CDX2Q99626 313 aaPredicted RBP20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 RNPEPQ9H4A4 650 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 SPC25Q9HBM1 224 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 CGNQ9P2M7 1197 aaKnown RBP20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 MAGEC2Q9UBF1 373 aaPredicted RBP20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 KAT6AQ92794 2004 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 LRRC10BA6NIK2 292 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 RARBP10826 455 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 NPTX2P47972 431 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 GJA9P57773 515 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 TLE2Q04725 743 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 SNX17Q15036 470 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 HAUS6Q7Z4H7 955 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 ZC3H3Q8IXZ2 948 aaKnown RBP20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 RETREG2Q8NC44 543 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 ACCSQ96QU6 501 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 UPF3AQ9H1J1 476 aaKnown RBP20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 XPNPEP3Q9NQH7 507 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 KMT5AQ9NQR1 393 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 LIMA1Q9UHB6 759 aaKnown RBP20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 EXOC7Q9UPT5 735 aa20.97■□□□□ 0.95
CSPG4P13-201ENST00000565545 TRIM43BA6NCK2 446 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 RRN3P2A6NIE6 340 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 CCDC169A6NNP5 214 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 KCNJ18B7U540 433 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 GNA14O95837 355 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 F2P00734 622 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 ZNF286BP0CG31 522 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 INSRRP14616 1297 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 RPL13P26373 211 aaKnown RBP20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 HOXD13P35453 343 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 NAMPTP43490 491 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 DNM2P50570 870 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 UBASH3AP57075 661 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 KCNJ12Q14500 433 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 MXD4Q14582 209 aaPredicted RBP20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 FSCN1Q16658 493 aaKnown RBP20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 TCP11X2Q5H9J9 407 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 HS2ST1Q7LGA3 356 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 RNF180Q86T96 592 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 TRIM43Q96BQ3 446 aaPredicted RBP20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 KATNAL1Q9BW62 490 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 IFNKQ9P0W0 207 aa20.96■□□□□ 0.95
CSPG4P13-201ENST00000565545 ASAP2O43150 1006 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 ZEB2O60315 1214 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 MYBPC2Q14324 1141 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 FILIP1LQ4L180 1135 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 ZC2HC1CQ53FD0 456 aaPredicted RBP20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 IRF2BP1Q8IU81 584 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 TMEM161BQ8NDZ6 487 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 GBP3Q9H0R5 595 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 PHF24Q9UPV7 400 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 PHLPP2Q6ZVD8 1323 aa20.95■□□□□ 0.94
CSPG4P13-201ENST00000565545 CETN3O15182 167 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 SLC16A4O15374 487 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 C22orf31O95567 290 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 PGK1P00558 417 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 GLRA2P23416 452 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 SMAD3P84022 425 aaKnown RBP20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 PPFIA1Q13136 1202 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 C1orf53Q5VUE5 145 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 LRRC55Q6ZSA7 311 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 SYCP3Q8IZU3 236 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 TMEM174Q8WUU8 243 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 PSPC1Q8WXF1 523 aaKnown RBP20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 BSNDQ8WZ55 320 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 XPO4Q9C0E2 1151 aaKnown RBP20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 ARHGAP28Q9P2N2 729 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 FRMPD3Q5JV73 1810 aa20.94■□□□□ 0.94
CSPG4P13-201ENST00000565545 A0A1B0GTH6 734 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 HAS3O00219 553 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 TGFB1I1O43294 461 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 TPM2P07951 284 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 MYL3P08590 195 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 ADAM9Q13443 819 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 HSP90AA4PQ58FG1 418 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 MAFAQ8NHW3 353 aaPredicted RBP20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 ASAP3Q8TDY4 903 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 KAT2BQ92831 832 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 LENG1Q96BZ8 264 aaPredicted RBP20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 SUGCTQ9HAC7 445 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 TBX20Q9UMR3 447 aa20.93■□□□□ 0.94
CSPG4P13-201ENST00000565545 DENND3A2RUS2 1198 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 PQBP1O60828 265 aaKnown RBP20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 CLTBP09497 229 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 C6orf222P0C671 652 aaPredicted RBP20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 RAG1P15918 1043 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 KLRC1P26715 233 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 TMOD1P28289 359 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 PSEN2P49810 448 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 KCNA1Q09470 495 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 TFDP1Q14186 410 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 MFSD10Q14728 455 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 NR1I3Q14994 352 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 KRT31Q15323 416 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 GRIK4Q16099 956 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms