RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TET1Q8NFU7 2136 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 GBF1Q92538 1859 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 FSD2A1L4K1 749 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 HIDE1A8MVS5 230 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 FSCN2O14926 492 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 ZC3H11AO75152 810 aaKnown RBP eCLIP7.15□□□□□ -1.26
TCF4-228ENST00000565393 ERLIN2O94905 339 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 EYA4O95677 639 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 ITGA4P13612 1032 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 RAB27AP51159 221 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 TFDP1Q14186 410 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 MXD4Q14582 209 aaPredicted RBP7.15□□□□□ -1.26
TCF4-228ENST00000565393 SMC1AQ14683 1233 aaKnown RBP7.15□□□□□ -1.26
TCF4-228ENST00000565393 ZNF174Q15697 407 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 DUSP6Q16828 381 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 ZNF598Q86UK7 904 aaKnown RBP7.15□□□□□ -1.26
TCF4-228ENST00000565393 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 RNF135Q8IUD6 432 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 CCDC83Q8IWF9 413 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 VPS52Q8N1B4 723 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 SLC39A11Q8N1S5 342 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 FAM184AQ8NB25 1140 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 NSUN7Q8NE18 718 aaKnown RBP7.15□□□□□ -1.26
TCF4-228ENST00000565393 URGCPQ8TCY9 931 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 PIGOQ8TEQ8 1089 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 C8orf76Q96K31 380 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 HSD17B14Q9BPX1 270 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 TRAIPQ9BWF2 469 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 DHX33Q9H6R0 707 aaKnown RBP7.15□□□□□ -1.26
TCF4-228ENST00000565393 NRDE2Q9H7Z3 1164 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 ANKEF1Q9NU02 776 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 FAN1Q9Y2M0 1017 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 USP15Q9Y4E8 981 aaPredicted RBP7.15□□□□□ -1.26
TCF4-228ENST00000565393 PPME1Q9Y570 386 aa7.15□□□□□ -1.26
TCF4-228ENST00000565393 DNAH12Q6ZR08 3092 aa7.15□□□□□ -1.27
TCF4-228ENST00000565393 C2orf71A6NGG8 1288 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 SPDYE4A6NLX3 237 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 INO80B-WBP1J3KQ70 363 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 GAS2O43903 313 aaKnown RBP7.14□□□□□ -1.27
TCF4-228ENST00000565393 NEMFO60524 1076 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 ZNF623O75123 536 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 NR1I2O75469 434 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 GLP2RO95838 553 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 POMCP01189 267 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 SSBP05455 408 aaKnown RBP eCLIP7.14□□□□□ -1.27
TCF4-228ENST00000565393 GALTP07902 379 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 XRCC6P12956 609 aaKnown RBP eCLIP7.14□□□□□ -1.27
TCF4-228ENST00000565393 EMC2Q15006 297 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 TPRNQ4KMQ1 711 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 CES5AQ6NT32 575 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 ANKRD54Q6NXT1 300 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 TMEM184AQ6ZMB5 413 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 DDX53Q86TM3 631 aaKnown RBP7.14□□□□□ -1.27
TCF4-228ENST00000565393 ZNF280BQ86YH2 543 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 SMRP1Q8NCR6 262 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 CNNM3Q8NE01 707 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 VN1R2Q8NFZ6 395 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 AUTS2Q8WXX7 1259 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 TNFRSF25Q93038 417 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 CPB2Q96IY4 423 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 ZSCAN31Q96LW9 406 aaPredicted RBP7.14□□□□□ -1.27
TCF4-228ENST00000565393 PHF7Q9BWX1 381 aaPredicted RBP7.14□□□□□ -1.27
TCF4-228ENST00000565393 S1PR5Q9H228 398 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 MINDY3Q9H8M7 445 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 RSAD1Q9HA92 442 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 UBN1Q9NPG3 1134 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 C11orf16Q9NQ32 467 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 TBC1D13Q9NVG8 400 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 DNAJB4Q9UDY4 337 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 MUTYHQ9UIF7 546 aa7.14□□□□□ -1.27
TCF4-228ENST00000565393 DOCK5Q9H7D0 1870 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 CARNS1A5YM72 827 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 CLASP2O75122 1294 aaKnown RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 DGAT1O75907 488 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 DDHD2O94830 711 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 LYPLA2O95372 231 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 HOXB8P17481 243 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 ATF7P17544 494 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 LIG1P18858 919 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 SP100P23497 879 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 KLRC2P26717 231 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 AXLP30530 894 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 HOXA11P31270 313 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 OR1G1P47890 313 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 SLC11A1P49279 550 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 RBM25P49756 843 aaKnown RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 PTENP60484 403 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 GIT2Q14161 759 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 TMEM132AQ24JP5 1023 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 ATAT1Q5SQI0 421 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 UBXN11Q5T124 520 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 AGMOQ6ZNB7 445 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 MRPL10Q7Z7H8 261 aaKnown RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 ZBTB33Q86T24 672 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 CATSPER3Q86XQ3 398 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms