RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 FAM102BQ5T8I3 360 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 DTHD1Q6ZMT9 781 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 ATG2AQ2TAZ0 1938 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 LRRIQ4A6NIV6 560 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
SPG7-211ENST00000565370 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
SPG7-211ENST00000565370 UBE3AQ05086 875 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 CAPSQ13938 189 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 PPP2R5AQ15172 486 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 GLB1LQ6UWU2 654 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 IGSF22Q8N9C0 903 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 COLGALT1Q8NBJ5 622 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 NFKBIZQ9BYH8 718 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
SPG7-211ENST00000565370 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 FSD2A1L4K1 749 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 GRM6O15303 877 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 NCK2O43639 380 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 CSPG5O95196 566 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 ARL2P36404 184 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 PTENP60484 403 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 TCEAL5Q5H9L2 206 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 ARL6IP4Q66PJ3 421 aaKnown RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 PADI6Q6TGC4 694 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 URGCPQ8TCY9 931 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 HELQQ8TDG4 1101 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 CASD1Q96PB1 797 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 UBE2ZQ9H832 354 aaPredicted RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 ALG13Q9NP73 1137 aaKnown RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 DDX19AQ9NUU7 478 aaKnown RBP13.63□□□□□ -0.23
SPG7-211ENST00000565370 PLAGL2Q9UPG8 496 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 PLXNA4Q9HCM2 1894 aa13.63□□□□□ -0.23
SPG7-211ENST00000565370 TSPAN1O60635 241 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 ITGB1P05556 798 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
SPG7-211ENST00000565370 GLRA2P23416 452 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
SPG7-211ENST00000565370 MBTD1Q05BQ5 628 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 HSCBQ8IWL3 235 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 KCTD17Q8N5Z5 321 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 POF1BQ8WVV4 589 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 KIFAP3Q92845 792 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 IFT74Q96LB3 600 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 BHMT2Q9H2M3 363 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 MINDY3Q9H8M7 445 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 UBN1Q9NPG3 1134 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 RNF19AQ9NV58 838 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 TYW1Q9NV66 732 aaKnown RBP13.62□□□□□ -0.23
SPG7-211ENST00000565370 PRMT7Q9NVM4 692 aaPredicted RBP13.62□□□□□ -0.23
SPG7-211ENST00000565370 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 DNM3Q9UQ16 869 aa13.62□□□□□ -0.23
SPG7-211ENST00000565370 VWA3AA6NCI4 1184 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 ZNF623O75123 536 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 FGF18O76093 207 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 CYP11B2P19099 503 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 NAMPTP43490 491 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 TFF2Q03403 129 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 KRT17Q04695 432 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 TMEM132AQ24JP5 1023 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 CDCA2Q69YH5 1023 aaPredicted RBP13.61□□□□□ -0.23
SPG7-211ENST00000565370 PDE12Q6L8Q7 609 aaKnown RBP13.61□□□□□ -0.23
SPG7-211ENST00000565370 EP400NLQ6ZTU2 488 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 DEPTORQ8TB45 409 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 AK8Q96MA6 479 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 CWH43Q9H720 699 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 RSAD1Q9HA92 442 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 GPRC5CQ9NQ84 441 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
SPG7-211ENST00000565370 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
SPG7-211ENST00000565370 SLC26A4O43511 780 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPG7-211ENST00000565370 EYA4O95677 639 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms