RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MYOCDQ8IZQ8 938 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 GUF1Q8N442 669 aaKnown RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 LRRC71Q8N4P6 559 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 PCSK9Q8NBP7 692 aaKnown RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 KLHDC9Q8NEP7 349 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 IFT74Q96LB3 600 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 C17orf75Q9HAS0 396 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 YBX2Q9Y2T7 364 aaKnown RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 ARID2Q68CP9 1835 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 UMODL1Q5DID0 1318 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 NRCAMQ92823 1304 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 IGKV6-21A0A0C4DH24 114 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 CCDC169A6NNP5 214 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 MAGEB2O15479 319 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 KIF20AO95235 890 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 TIMP1P01033 207 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.45
SF3B3-205ENST00000564899 KLRC1P26715 233 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 NMT1P30419 496 aaKnown RBP12.21□□□□□ -0.45
SF3B3-205ENST00000564899 ARL2P36404 184 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 CASP5P51878 434 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 PEX3P56589 373 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 STX17P56962 302 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 IQCB1Q15051 598 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 KCNA10Q16322 511 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 IER5Q5VY09 327 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 EPM2AIP1Q7L775 607 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-205ENST00000564899 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
SF3B3-205ENST00000564899 RETREG2Q8NC44 543 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 ASAP3Q8TDY4 903 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 SCFD1Q8WVM8 642 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
SF3B3-205ENST00000564899 TCP11Q8WWU5 503 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-205ENST00000564899 FIZ1Q96SL8 496 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 PPP1R12CQ9BZL4 782 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.45
SF3B3-205ENST00000564899 MYH9P35579 1960 aaKnown RBP12.21□□□□□ -0.46
SF3B3-205ENST00000564899 UBE4BO95155 1302 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 WDR81Q562E7 1941 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 BICDL2A1A5D9 508 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 SMTNL1A8MU46 457 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 IKBKBO14920 756 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 EIF3DO15371 548 aaKnown RBP eCLIP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PRPF6O94906 941 aaKnown RBP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 ASGR1P07306 291 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 GLRA2P23416 452 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 CCNE1P24864 410 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 NPTX2P47972 431 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 DNM2P50570 870 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 CLCN3P51790 818 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 SMTNP53814 917 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 DRP2Q13474 957 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 ALCAMQ13740 583 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 BMT2Q1RMZ1 405 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 EFCAB12Q6NXP0 572 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 MTHFD1LQ6UB35 978 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 ZNF720Q7Z2F6 126 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 NELFCDQ8IXH7 590 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 METTL13Q8N6R0 699 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 ENOX1Q8TC92 643 aaKnown RBP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PPP1R13LQ8WUF5 828 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PSPC1Q8WXF1 523 aaKnown RBP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 P2RX5Q93086 422 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 ZBTB10Q96DT7 871 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 NKX2-4Q9H2Z4 354 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 GRPEL1Q9HAV7 217 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 KMT5AQ9NQR1 393 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 STARD7Q9NQZ5 370 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PCDHB13Q9Y5F0 798 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PRRC2BQ5JSZ5 2229 aaKnown RBP12.2□□□□□ -0.46
SF3B3-205ENST00000564899 WDFY4Q6ZS81 3184 aa12.2□□□□□ -0.46
SF3B3-205ENST00000564899 PIEZO1Q92508 2521 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 C17orf102A2RUQ5 167 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 MOXD2PA6NHM9 499 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 SLC16A4O15374 487 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 CABYRO75952 493 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 MYOGP15173 224 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 IGFBP4P22692 258 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 TMOD1P28289 359 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 HOXD11P31277 338 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-205ENST00000564899 NAMPTP43490 491 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 MRE11P49959 708 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 KCNQ1P51787 676 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 TPM4P67936 248 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms