RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 YTHDF3Q7Z739 585 aaKnown RBP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ACER1Q8TDN7 264 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 MYCBPQ99417 103 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ERP44Q9BS26 406 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 CHORDC1Q9UHD1 332 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 ALG6Q9Y672 507 aa16.75■□□□□ 0.27
GTF3C1-205ENST00000564747 FSBPO95073 299 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 CCDC172P0C7W6 258 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 CEP55Q53EZ4 464 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 C6orf89Q6UWU4 347 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 PRPF38AQ8NAV1 312 aaKnown RBP16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 CSRNP1Q96S65 589 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 AGPAT1Q99943 283 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 ZNF577Q9BSK1 485 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 TXLNGYQ9BZA5 131 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 UBE2TQ9NPD8 197 aaPredicted RBP16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 DIS3Q9Y2L1 958 aaKnown RBP16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 DAAM1Q9Y4D1 1078 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 PPFIA2O75334 1257 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 TRIM37O94972 964 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 IFFO1Q0D2I5 559 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 KIF22Q14807 665 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 DAW1Q8N136 415 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 RAPGEF5Q92565 580 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 RAB17Q9H0T7 212 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 ZDHHC18Q9NUE0 388 aa16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
GTF3C1-205ENST00000564747 HIP1RO75146 1068 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 SHBGP04278 402 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 PLTPP55058 493 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 STXBP4Q6ZWJ1 553 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 MASTLQ96GX5 879 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 LXNQ9BS40 222 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 SNX24Q9Y343 169 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 DDX39AO00148 427 aaKnown RBP16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 ONECUT3O60422 494 aaPredicted RBP16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 VCAM1P19320 739 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 MDM1Q8TC05 714 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 KRT35Q92764 455 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 PRMT6Q96LA8 375 aaPredicted RBP16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 GOPCQ9HD26 462 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 SERPINA10Q9UK55 444 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 UBE4BO95155 1302 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
GTF3C1-205ENST00000564747 GOLGA6L10A0A0M3HER8 536 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 CAND2O75155 1236 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 SETQ01105 290 aaPredicted RBP16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 MAPK7Q13164 816 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 C18orf8Q96DM3 657 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 NAP1L3Q99457 506 aaPredicted RBP16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 EPB41L4BQ9H329 900 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 CTTNBP2NLQ9P2B4 639 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 ARHGEF35A5YM69 484 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 TMEM110-MUSTN1A8MSY1 372 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 KRT13P13646 458 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 JAMLQ86YT9 394 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 PSMD1Q99460 953 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 GGA2Q9UJY4 613 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 PDE6BP35913 854 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 PPP3CAQ08209 521 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 SLC9A9Q8IVB4 645 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 ZSWIM2Q8NEG5 633 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 FBXO25Q8TCJ0 367 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
GTF3C1-205ENST00000564747 MYH11P35749 1972 aa16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 VIL1P09327 827 aaKnown RBP16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 BCRP11274 1271 aa16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 GCLMP48507 274 aa16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 ZDHHC14Q8IZN3 488 aa16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 PNMA2Q9UL42 364 aa16.71■□□□□ 0.27
GTF3C1-205ENST00000564747 PHF20L1A8MW92 1017 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 K7ENM7 598 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 TULP1O00294 542 aaPredicted RBP16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 IPO5O00410 1097 aaKnown RBP16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 KIAA0391O15091 583 aaKnown RBP16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 MEX3CQ5U5Q3 659 aaKnown RBP16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 ZDHHC24Q6UX98 284 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 RHOT2Q8IXI1 618 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 GPATCH11Q8N954 259 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 KAT5Q92993 513 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 TLCD1Q96CP7 247 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms