RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 COG5Q9UP83 839 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 PLAGL2Q9UPG8 496 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 INO80B-WBP1J3KQ70 363 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 GLRA2P23416 452 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 RAB27AP51159 221 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 CAPSQ13938 189 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 PCBP1Q15365 356 aaKnown RBP eCLIP20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 IL17AQ16552 155 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 ECM1Q16610 540 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 AAK1Q2M2I8 961 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 ZNF598Q86UK7 904 aaKnown RBP20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 KLHL23Q8NBE8 558 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 HLA-CQ95604 372 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 ALG13Q9NP73 1137 aaKnown RBP20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 RNF19AQ9NV58 838 aa20.36■□□□□ 0.85
SYNGR3-204ENST00000564642 PP2D1A8MPX8 630 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 LAG3P18627 525 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 CYP11B2P19099 503 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 CDC25AP30304 524 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 AXLP30530 894 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 TJAP1Q5JTD0 557 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 ARL6IP4Q66PJ3 421 aaKnown RBP20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 IFNLR1Q8IU57 520 aaPredicted RBP20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 LRRC43Q8N309 656 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 HELQQ8TDG4 1101 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 SYMPKQ92797 1274 aaKnown RBP20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 PGBD4Q96DM1 585 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 ASB2Q96Q27 587 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 BHMT2Q9H2M3 363 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 NSUN3Q9H649 340 aaKnown RBP20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 CWH43Q9H720 699 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 GPRC5CQ9NQ84 441 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 DNM3Q9UQ16 869 aa20.35■□□□□ 0.85
SYNGR3-204ENST00000564642 VWA3AA6NCI4 1184 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 LRRIQ4A6NIV6 560 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 ZNF623O75123 536 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 ITGB1P05556 798 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 ATF7P17544 494 aaPredicted RBP20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 HOXD11P31277 338 aaPredicted RBP20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 LONRF3Q496Y0 759 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 CLLU1OSQ5K130 101 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 THNSL1Q8IYQ7 743 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 COLGALT1Q8NBJ5 622 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 SPPL3Q8TCT6 385 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 NFKBIZQ9BYH8 718 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 PCDHB2Q9Y5E7 798 aa20.34■□□□□ 0.85
SYNGR3-204ENST00000564642 PLXNA4Q9HCM2 1894 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 TRANK1O15050 2925 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 CSPG5O95196 566 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 BMP15O95972 392 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 SYT1P21579 422 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 HOXA11P31270 313 aaPredicted RBP20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 ZRSR1Q15695 479 aaKnown RBP20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 TCEAL5Q5H9L2 206 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 LRRC55Q6ZSA7 311 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 RSPH1Q8WYR4 309 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 LPPQ93052 612 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 SNX21Q969T3 373 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 MRPL9Q9BYD2 267 aaKnown RBP20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 HCSTQ9UBK5 93 aa20.33■□□□□ 0.85
SYNGR3-204ENST00000564642 E9PMD0 336 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 TSPAN1O60635 241 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 EYA4O95677 639 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 TFF2Q03403 129 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 MBTD1Q05BQ5 628 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 NOTUMQ6P988 496 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 GLB1LQ6UWU2 654 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 ZBTB8OSQ8IWT0 167 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 CNNM3Q8NE01 707 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 POF1BQ8WVV4 589 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 CPB2Q96IY4 423 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 MMTAG2Q9BU76 263 aaKnown RBP20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 PRUNE2Q8WUY3 3088 aa20.32■□□□□ 0.84
SYNGR3-204ENST00000564642 ATG2AQ2TAZ0 1938 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 FGF18O76093 207 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 PPP2R5AQ15172 486 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 KCNT2Q6UVM3 1135 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 CCDC51Q96ER9 411 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 CDK5RAP3Q96JB5 506 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 IFT74Q96LB3 600 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 ZNF558Q96NG5 402 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 NT5C3AQ9H0P0 336 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 C2orf40Q9H1Z8 148 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 INPP5FQ9Y2H2 1132 aa20.31■□□□□ 0.84
SYNGR3-204ENST00000564642 DNAJB1P25685 340 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 UBE3AQ05086 875 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 SF3A1Q15459 793 aaKnown RBP20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 NOMO2Q5JPE7 1267 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 UBXN11Q5T124 520 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 EP400NLQ6ZTU2 488 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 MRPL10Q7Z7H8 261 aaKnown RBP20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 DEPTORQ8TB45 409 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 KIFAP3Q92845 792 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 PPP2R3CQ969Q6 453 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 AK8Q96MA6 479 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms