RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 NOC2LQ9Y3T9 749 aaKnown RBP6.84□□□□□ -1.31
UBR1-205ENST00000564540 UBE2QL1A1L167 161 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 AKAP8O43823 692 aaKnown RBP6.83□□□□□ -1.32
UBR1-205ENST00000564540 VSIG10L2P0DP72 767 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 GAAP10253 952 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 KIR2DL3P43628 341 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 CD69Q07108 199 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 PDCD1Q15116 288 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 KRT40Q6A162 431 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 CCDC62Q6P9F0 684 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 HDGFL2Q7Z4V5 671 aaPredicted RBP6.83□□□□□ -1.32
UBR1-205ENST00000564540 RASSF3Q86WH2 238 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 LYSMD2Q8IV50 215 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 CLRN3Q8NCR9 226 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 CHAC2Q8WUX2 184 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 GAB3Q8WWW8 586 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 FAM89AQ96GI7 184 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 C14orf93Q9H972 538 aaKnown RBP6.83□□□□□ -1.32
UBR1-205ENST00000564540 TLR9Q9NR96 1032 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 TMPRSS11EQ9UL52 423 aa6.83□□□□□ -1.32
UBR1-205ENST00000564540 PLSCR1O15162 318 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 ZEB2O60315 1214 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 FSBPO95073 299 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 SOX5P35711 763 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 TRIM25Q14258 630 aaKnown RBP6.82□□□□□ -1.32
UBR1-205ENST00000564540 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 SPTY2D1Q68D10 685 aaPredicted RBP6.82□□□□□ -1.32
UBR1-205ENST00000564540 SGMS1Q86VZ5 419 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 PIK3C3Q8NEB9 887 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 PPP1R14CQ8TAE6 165 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 EXTL1Q92935 676 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 UIMC1Q96RL1 719 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 TOPORSQ9NS56 1045 aaPredicted RBP6.82□□□□□ -1.32
UBR1-205ENST00000564540 ING3Q9NXR8 418 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 NCDNQ9UBB6 729 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 RCAN3Q9UKA8 241 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
UBR1-205ENST00000564540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.81□□□□□ -1.32
UBR1-205ENST00000564540 CAPN14A8MX76 684 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 LY86O95711 162 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 AMHP03971 560 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 JUNP05412 331 aaKnown RBP6.81□□□□□ -1.32
UBR1-205ENST00000564540 HIBADHP31937 336 aaKnown RBP6.81□□□□□ -1.32
UBR1-205ENST00000564540 HHEXQ03014 270 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 PPARAQ07869 468 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 MAN2A1Q16706 1144 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 USP39Q53GS9 565 aaKnown RBP6.81□□□□□ -1.32
UBR1-205ENST00000564540 AFAP1L2Q8N4X5 818 aa6.81□□□□□ -1.32
UBR1-205ENST00000564540 SEC24DO94855 1032 aaPredicted RBP6.8□□□□□ -1.32
UBR1-205ENST00000564540 LPLP06858 475 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 ZXDAP98168 799 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 NRN1LQ496H8 165 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 CT83Q5H943 113 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 CT47A1Q5JQC4 288 aaPredicted RBP6.8□□□□□ -1.32
UBR1-205ENST00000564540 PITRM1Q5JRX3 1037 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 FAM111BQ6SJ93 734 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 RNF207Q6ZRF8 634 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 TCF25Q9BQ70 676 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 EVLQ9UI08 416 aaPredicted RBP6.8□□□□□ -1.32
UBR1-205ENST00000564540 PRSS50Q9UI38 385 aa6.8□□□□□ -1.32
UBR1-205ENST00000564540 APOBEC2Q9Y235 224 aaKnown RBP6.8□□□□□ -1.32
UBR1-205ENST00000564540 ALDH1A2O94788 518 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 CLSTN1O94985 981 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 MGAT5Q09328 741 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 EGFLAMQ63HQ2 1017 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 LHFPL2Q6ZUX7 228 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 SLC41A1Q8IVJ1 513 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 CMIPQ8IY22 773 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 UNC5BQ8IZJ1 945 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 MPHOSPH9Q99550 1183 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 VPS11Q9H270 941 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 KCNG1Q9UIX4 513 aa6.79□□□□□ -1.32
UBR1-205ENST00000564540 ULK1O75385 1050 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 STC2O76061 302 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 XPAP23025 273 aaPredicted RBP6.78□□□□□ -1.32
UBR1-205ENST00000564540 ACRV1P26436 265 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 GPR15P49685 360 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 LGALS4P56470 323 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 SESN3P58005 492 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 STAT4Q14765 748 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
UBR1-205ENST00000564540 CMTM4Q8IZR5 234 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 Q8N1X5 172 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
UBR1-205ENST00000564540 IL17DQ8TAD2 202 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 EAF2Q96CJ1 260 aaPredicted RBP6.78□□□□□ -1.32
UBR1-205ENST00000564540 FAM126AQ9BYI3 521 aaPredicted RBP6.78□□□□□ -1.32
UBR1-205ENST00000564540 WNT8AQ9H1J5 351 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 KCTD10Q9H3F6 313 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 EDARQ9UNE0 448 aa6.78□□□□□ -1.32
UBR1-205ENST00000564540 MTSS1O43312 755 aa6.77□□□□□ -1.33
UBR1-205ENST00000564540 NRP2O60462 931 aa6.77□□□□□ -1.33
UBR1-205ENST00000564540 EYA4O95677 639 aa6.77□□□□□ -1.33
UBR1-205ENST00000564540 VIL1P09327 827 aaKnown RBP6.77□□□□□ -1.33
UBR1-205ENST00000564540 C6P13671 934 aa6.77□□□□□ -1.33
UBR1-205ENST00000564540 CNGA1P29973 690 aa6.77□□□□□ -1.33
UBR1-205ENST00000564540 NPEPPSP55786 919 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms