RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 UBXN2BQ14CS0 331 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 LONRF3Q496Y0 759 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 PDXDC2PQ6P474 469 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 TSSK4Q6SA08 328 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 ABHD15Q6UXT9 468 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 CKAP2LQ8IYA6 745 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
RNF40-205ENST00000563909 SMG7Q92540 1137 aaKnown RBP18.01■□□□□ 0.47
RNF40-205ENST00000563909 ZNF668Q96K58 619 aaPredicted RBP18.01■□□□□ 0.47
RNF40-205ENST00000563909 GBP3Q9H0R5 595 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 ZNF302Q9NR11 478 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 TBC1D13Q9NVG8 400 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.01■□□□□ 0.47
RNF40-205ENST00000563909 PCDHA6Q9UN73 950 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 AKT3Q9Y243 479 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 PCDHA8Q9Y5H6 950 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 SPEGQ15772 3267 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 ZFYVE26Q68DK2 2539 aa18.01■□□□□ 0.47
RNF40-205ENST00000563909 FAM170BA6NMN3 283 aa18■□□□□ 0.47
RNF40-205ENST00000563909 DDX39AO00148 427 aaKnown RBP18■□□□□ 0.47
RNF40-205ENST00000563909 SLC27A2O14975 620 aa18■□□□□ 0.47
RNF40-205ENST00000563909 LILRB3O75022 631 aa18■□□□□ 0.47
RNF40-205ENST00000563909 RFPL2O75678 378 aa18■□□□□ 0.47
RNF40-205ENST00000563909 ATP4AP20648 1035 aa18■□□□□ 0.47
RNF40-205ENST00000563909 FGFR4P22455 802 aa18■□□□□ 0.47
RNF40-205ENST00000563909 CLCN3P51790 818 aa18■□□□□ 0.47
RNF40-205ENST00000563909 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
RNF40-205ENST00000563909 CREB3L3Q68CJ9 461 aa18■□□□□ 0.47
RNF40-205ENST00000563909 ELMSAN1Q6PJG2 1045 aa18■□□□□ 0.47
RNF40-205ENST00000563909 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
RNF40-205ENST00000563909 CATIPQ7Z7H3 387 aa18■□□□□ 0.47
RNF40-205ENST00000563909 CCDC60Q8IWA6 550 aaPredicted RBP18■□□□□ 0.47
RNF40-205ENST00000563909 NELL1Q92832 810 aa18■□□□□ 0.47
RNF40-205ENST00000563909 RHOBTB2Q9BYZ6 727 aa18■□□□□ 0.47
RNF40-205ENST00000563909 AGO4Q9HCK5 861 aaKnown RBP18■□□□□ 0.47
RNF40-205ENST00000563909 MRPL17Q9NRX2 175 aaKnown RBP18■□□□□ 0.47
RNF40-205ENST00000563909 DACT1Q9NYF0 836 aa18■□□□□ 0.47
RNF40-205ENST00000563909 DNAJB4Q9UDY4 337 aa18■□□□□ 0.47
RNF40-205ENST00000563909 INPP5FQ9Y2H2 1132 aa18■□□□□ 0.47
RNF40-205ENST00000563909 C2CD2LO14523 706 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 KIF5BP33176 963 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 SLC11A1P49279 550 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 SWSAP1Q6NVH7 229 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 GLB1LQ6UWU2 654 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 GET4Q7L5D6 327 aaPredicted RBP17.99■□□□□ 0.47
RNF40-205ENST00000563909 RALYLQ86SE5 291 aaKnown RBP17.99■□□□□ 0.47
RNF40-205ENST00000563909 LPPQ93052 612 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 RPP25Q9BUL9 199 aaKnown RBP17.99■□□□□ 0.47
RNF40-205ENST00000563909 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
RNF40-205ENST00000563909 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 PIDD1Q9HB75 910 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 DPP7Q9UHL4 492 aa17.99■□□□□ 0.47
RNF40-205ENST00000563909 MIA3Q5JRA6 1907 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 E7EWF7 191 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 SPATA31D3P0C874 917 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 HSPA4P34932 840 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 AK2P54819 239 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 LPAL2Q16609 132 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 NOMO2Q5JPE7 1267 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 SPATA31D4Q6ZUB0 917 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 ZNF707Q96C28 371 aaPredicted RBP17.98■□□□□ 0.47
RNF40-205ENST00000563909 OSBPL6Q9BZF3 934 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 STK39Q9UEW8 545 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 RAB23Q9ULC3 237 aa17.98■□□□□ 0.47
RNF40-205ENST00000563909 COL4A3Q01955 1670 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 ADH1AP07327 375 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 DARSP14868 501 aaKnown RBP17.97■□□□□ 0.47
RNF40-205ENST00000563909 CD72P21854 359 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 PHKA2P46019 1235 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 MLF2Q15773 248 aaPredicted RBP17.97■□□□□ 0.47
RNF40-205ENST00000563909 TSGA10IPQ3SY00 556 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 SLC44A4Q53GD3 710 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 EFCAB12Q6NXP0 572 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 ZNF280BQ86YH2 543 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 NCOA7Q8NI08 942 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 RSPH1Q8WYR4 309 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 PHKBQ93100 1093 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 SCLT1Q96NL6 688 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 PATJQ8NI35 1801 aa17.97■□□□□ 0.47
RNF40-205ENST00000563909 SETXQ7Z333 2677 aaKnown RBP17.96■□□□□ 0.47
RNF40-205ENST00000563909 DOCK8Q8NF50 2099 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 MAGEB2O15479 319 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 TEX28O15482 410 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 B4GALT3O60512 393 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 CSDE1O75534 798 aaKnown RBP17.96■□□□□ 0.47
RNF40-205ENST00000563909 GLUD1P00367 558 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 TMOD1P28289 359 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 MAGEA9P43362 315 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 PRKCQQ04759 706 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 KRT32Q14532 448 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 CEP55Q53EZ4 464 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 MIS18BP1Q6P0N0 1132 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 LRRC71Q8N4P6 559 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 CTCFLQ8NI51 663 aaPredicted RBP17.96■□□□□ 0.47
RNF40-205ENST00000563909 FGF14Q92915 247 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 KCNB2Q92953 911 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 RPS6KC1Q96S38 1066 aa17.96■□□□□ 0.47
RNF40-205ENST00000563909 MEIS3P2A8K0S8 358 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms