RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 EPHB6O15197 1021 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 MGRN1O60291 552 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 PAX7P23759 505 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 TRIP13Q15645 432 aaPredicted RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 XXYLT1Q8NBI6 393 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 FAXDC2Q96IV6 333 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 FMO2Q99518 471 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 CHORDC1Q9UHD1 332 aaPredicted RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 EMSYQ7Z589 1322 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 DNM1LO00429 736 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 EVI5O60447 810 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 FTLP02792 175 aaPredicted RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 TM4SF1P30408 202 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 NSFP46459 744 aaKnown RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 GALCP54803 685 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 DDX42Q86XP3 938 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNF40-204ENST00000563683 PRM3Q9NNZ6 103 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 NKIRAS1Q9NYS0 192 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 TJP1Q07157 1748 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 SART1O43290 800 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 PAEPP09466 180 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 MAPK4P31152 587 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 HSPA1LP34931 641 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 HSD17B3P37058 310 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 DR1Q01658 176 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 SPP2Q13103 211 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 PPP2R5EQ16537 467 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 INTS8Q75QN2 995 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 RUSC1Q9BVN2 902 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 DAPK3O43293 454 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 CRELD2Q6UXH1 353 aaPredicted RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 FAM114A2Q9NRY5 505 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 BAIAP2L1Q9UHR4 511 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 SLC12A6Q9UHW9 1150 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 TMOD1P28289 359 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 SARNPP82979 210 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 COL23A1Q86Y22 540 aaPredicted RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 ATP6V0A1Q93050 837 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 TATDN2Q93075 761 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 MMTAG2Q9BU76 263 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
RNF40-204ENST00000563683 INTS2Q9H0H0 1204 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 HERC5Q9UII4 1024 aaKnown RBP11.24□□□□□ -0.61
RNF40-204ENST00000563683 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 CES2O00748 559 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 P4HBP07237 508 aaKnown RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 GSTA1P08263 222 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 RPSAP08865 295 aaKnown RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 QARSP47897 775 aaKnown RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 VAMP7P51809 220 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 TLDC1Q6P9B6 456 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 CERS5Q8N5B7 392 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 MAB21L3Q8N8X9 362 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 SYT2Q8N9I0 419 aaPredicted RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 MTMR9Q96QG7 549 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 NOD2Q9HC29 1040 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 CCDC188H7C350 402 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 RAD51CO43502 376 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 SOX5P35711 763 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 GIT2Q14161 759 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 HIBCHQ6NVY1 386 aaPredicted RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 PNMA8AQ86V59 439 aaPredicted RBP11.23□□□□□ -0.61
RNF40-204ENST00000563683 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 METTL13Q8N6R0 699 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 ARMC2Q8NEN0 867 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 SIK3Q9Y2K2 1263 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 CFAP73A6NFT4 308 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 AKAP3O75969 853 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 PIK3CAP42336 1068 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 RINT1Q6NUQ1 792 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 HAUS6Q7Z4H7 955 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 CCDC63Q8NA47 563 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.613e-7■■■□□ 15.8
RNF40-204ENST00000563683 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
RNF40-204ENST00000563683 PITPNM2Q9BZ72 1349 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 TBX3O15119 743 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 FMO5P49326 533 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 ZNF844Q08AG5 666 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 EPHA7Q15375 998 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 NAB2Q15742 525 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 SHROOM1Q2M3G4 852 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms