RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
CDR2-203ENST00000563573 MED23Q9ULK4 1368 aa5.5□□□□□ -1.53
CDR2-203ENST00000563573 GOLGB1Q14789 3259 aaKnown RBP5.5□□□□□ -1.53
CDR2-203ENST00000563573 COL4A1P02462 1669 aa5.5□□□□□ -1.53
CDR2-203ENST00000563573 PDS5AQ29RF7 1337 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 EPB41L2O43491 1005 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 IDH1O75874 414 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 LDHCP07864 332 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 TCF3P15923 654 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 GSTO1P78417 241 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 PRR5P85299 388 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 AMPD2Q01433 879 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 CHAF1AQ13111 956 aaPredicted RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 VMACQ2NL98 169 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 SLC9C2Q5TAH2 1124 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 TTLL5Q6EMB2 1281 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 DBX2Q6ZNG2 339 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 ARHGEF39Q8N4T4 335 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 CRACR2BQ8N4Y2 399 aaPredicted RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 LZTR1Q8N653 840 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 NETO2Q8NC67 525 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 TDRD7Q8NHU6 1098 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 FEZF2Q8TBJ5 459 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 EDC3Q96F86 508 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 TSPAN17Q96FV3 270 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 PEX11GQ96HA9 241 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 PSMD1Q99460 953 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 NOL10Q9BSC4 688 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 RTFDC1Q9BY42 306 aaPredicted RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 C22orf23Q9BZE7 217 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 RAI14Q9P0K7 980 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 RFX7Q2KHR2 1363 aa5.49□□□□□ -1.53
CDR2-203ENST00000563573 BRCA1P38398 1863 aaKnown RBP5.49□□□□□ -1.53
CDR2-203ENST00000563573 RAD50Q92878 1312 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 DOCK2Q92608 1830 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 ARFGEF1Q9Y6D6 1849 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 A0A1W2PQH9 124 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 C2orf71A6NGG8 1288 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 PPIP5K2O43314 1243 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 GLI4P10075 376 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 NAT2P11245 290 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 PAMP19021 973 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 RASGRF1Q13972 1273 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 NAA16Q6N069 864 aaPredicted RBP5.48□□□□□ -1.53
CDR2-203ENST00000563573 OLFM4Q6UX06 510 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 CCDC81Q6ZN84 652 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 JDP2Q8WYK2 163 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 BORCS6Q96GS4 357 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 GPR101Q96P66 508 aaPredicted RBP5.48□□□□□ -1.53
CDR2-203ENST00000563573 SUSD2Q9UGT4 822 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 BACE2Q9Y5Z0 518 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 PMF1-BGLAPU3KQ54 211 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 KIAA1551Q9HCM1 1747 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 FAM205AQ6ZU69 1335 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 SALL1Q9NSC2 1324 aa5.48□□□□□ -1.53
CDR2-203ENST00000563573 FER1L6Q2WGJ9 1857 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 MYH2Q9UKX2 1941 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 FFAR3O14843 346 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 SGSM2O43147 1006 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 ECE2O60344 883 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 BAG3O95817 575 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 EPHX1P07099 455 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 GNAT2P19087 354 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 TACR1P25103 407 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 KLRK1P26718 216 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 ADD2P35612 726 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 LIMS1P48059 325 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 SLURP1P55000 103 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 FKBP1AP62942 108 aaKnown RBP5.47□□□□□ -1.53
CDR2-203ENST00000563573 KIAA2012Q0VF49 1180 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 C9orf131Q5VYM1 1079 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 POMZP3Q6PJE2 187 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 B3GNT8Q7Z7M8 397 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 DZIP1Q86YF9 867 aaKnown RBP5.47□□□□□ -1.53
CDR2-203ENST00000563573 CERS3Q8IU89 383 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 MAGEB6Q8N7X4 407 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 TP53I13Q8NBR0 393 aaPredicted RBP5.47□□□□□ -1.53
CDR2-203ENST00000563573 ADCY4Q8NFM4 1077 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 FNIP1Q8TF40 1166 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 CPLX3Q8WVH0 158 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 CPA5Q8WXQ8 436 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 APPBP2Q92624 585 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 ALG3Q92685 438 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 SEC16BQ96JE7 1060 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 FAM227BQ96M60 508 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 SYT17Q9BSW7 474 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 DBNDD1Q9H9R9 158 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 PIH1D3Q9NQM4 214 aaKnown RBP5.47□□□□□ -1.53
CDR2-203ENST00000563573 CGGBP1Q9UFW8 167 aaPredicted RBP5.47□□□□□ -1.53
CDR2-203ENST00000563573 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 STRIP2Q9ULQ0 834 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 SUGT1Q9Y2Z0 365 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 LTBP1Q14766 1721 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 MAST3O60307 1309 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 ZNF532Q9HCE3 1301 aa5.47□□□□□ -1.53
CDR2-203ENST00000563573 NPHP3-ACAD11A0A0J9YXS1 232 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 SH3D21A4FU49 640 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms