RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 MRPL10Q7Z7H8 261 aaKnown RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 DAW1Q8N136 415 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 TMEM117Q9H0C3 514 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 POLR3FQ9H1D9 316 aaPredicted RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 FAM105AQ9NUU6 356 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 TYW1Q9NV66 732 aaKnown RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 LRFN2Q9ULH4 789 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 PLAGL2Q9UPG8 496 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 TCF20Q9UGU0 1960 aaKnown RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 TBKBP1A7MCY6 615 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 EDN1P05305 212 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 CCT6AP40227 531 aaKnown RBP16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 GRIN1Q05586 938 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 MAPK7Q13164 816 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 PTPAQ15257 358 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 PCBP1Q15365 356 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 AGMOQ6ZNB7 445 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 CATSPER4Q7RTX7 472 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 KLHL23Q8NBE8 558 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 MCPH1Q8NEM0 835 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 ERMNQ8TAM6 284 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 SPPL3Q8TCT6 385 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 SCLT1Q96NL6 688 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 DACT1Q9NYF0 836 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 KIAA1024Q9UPX6 916 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 PIN4Q9Y237 131 aaKnown RBP16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 TRIP11Q15643 1979 aa16.44■□□□□ 0.22
RPUSD1-204ENST00000563560 TTLL13PA6NNM8 815 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 E9PMD0 336 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 B4GALT3O60512 393 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 TMEM119Q4V9L6 283 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 COLGALT1Q8NBJ5 622 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 SMG8Q8ND04 991 aaKnown RBP16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 ATXN2LQ8WWM7 1075 aaKnown RBP16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 LPPQ93052 612 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 CCDC113Q9H0I3 377 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 FZD8Q9H461 694 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 DDX19AQ9NUU7 478 aaKnown RBP16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 THEGQ9P2T0 379 aa16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 MORC2Q9Y6X9 1032 aaPredicted RBP16.43■□□□□ 0.22
RPUSD1-204ENST00000563560 INPPL1O15357 1258 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 B4GALT5O43286 388 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 EYA4O95677 639 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 ARF4P18085 180 aaPredicted RBP16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 AFF1P51825 1210 aaKnown RBP16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 TFF2Q03403 129 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 FAM187BQ17R55 369 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 COL25A1Q9BXS0 654 aaPredicted RBP16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 EIF2AQ9BY44 585 aaKnown RBP16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 ALG13Q9NP73 1137 aaKnown RBP16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 PCDHB2Q9Y5E7 798 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
RPUSD1-204ENST00000563560 VWA3AA6NCI4 1184 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 HOXA2O43364 376 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 OFD1O75665 1012 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 PDCP20941 246 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 IRS1P35568 1242 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 RAB27AP51159 221 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 TFDP1Q14186 410 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 SF3A1Q15459 793 aaKnown RBP16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 CTC1Q2NKJ3 1217 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 TWF2Q6IBS0 349 aaKnown RBP16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 FAM173BQ6P4H8 233 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 ASB2Q96Q27 587 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 RAB34Q9BZG1 259 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 POLD4Q9HCU8 107 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 CLIC4Q9Y696 253 aa16.41■□□□□ 0.22
RPUSD1-204ENST00000563560 PDCD11Q14690 1871 aaKnown RBP16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 A0A1B0GUA9 196 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 FSCN2O14926 492 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 BMP1P13497 986 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 AXLP30530 894 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 LTBRP36941 435 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 PLCB3Q01970 1234 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 TCEAL5Q5H9L2 206 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 KRT79Q5XKE5 535 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 MAEAQ7L5Y9 396 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 LRRC43Q8N309 656 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 KCTD17Q8N5Z5 321 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 CPB2Q96IY4 423 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms