RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 HIST1H2AHQ96KK5 128 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 UIMC1Q96RL1 719 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 FEZ1Q99689 392 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 HIST1H2AJQ99878 128 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 SPTLC3Q9NUV7 552 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 MYPNQ86TC9 1320 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 STC2O76061 302 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 FSBPO95073 299 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 GAAP10253 952 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 MAN2A2P49641 1150 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ESPNLQ6ZVH7 1005 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ELOA2Q8IYF1 753 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 CMTM4Q8IZR5 234 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 MB21D1Q8N884 522 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 PIK3C3Q8NEB9 887 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 PPP1R14CQ8TAE6 165 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ZNF483Q8TF39 744 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 FERMT2Q96AC1 680 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ARL8AQ96BM9 186 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 MFSD3Q96ES6 412 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ZNF512Q96ME7 567 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 OSBPL6Q9BZF3 934 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 MMRN2Q9H8L6 949 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 PARPBPQ9NWS1 579 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ING3Q9NXR8 418 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 PCDHB6Q9Y5E3 794 aa4.85□□□□□ -1.63
HMGB1P33-201ENST00000563485 ST20-MTHFSA0A0A6YYL1 179 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 KLRG2A4D1S0 409 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 MTSS1O43312 755 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 PFKMP08237 780 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 SCNN1BP51168 640 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 RABGGTBP53611 331 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 IL2P60568 153 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 SLC25A3Q00325 362 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 CD69Q07108 199 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 CNGB1Q14028 1251 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 SPIDRQ14159 915 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 SART3Q15020 963 aaKnown RBP4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 MAN2A1Q16706 1144 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 GPR158Q5T848 1215 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 KIAA0907Q7Z7F0 614 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 OR2W6PQ8NHA6 318 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 NEU4Q8WWR8 484 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 GPR87Q9BY21 358 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 TRIM8Q9BZR9 551 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 SLC2A4RGQ9NR83 387 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 USP36Q9P275 1121 aaKnown RBP4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 USP18Q9UMW8 372 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 PLAAQ9Y263 795 aa4.84□□□□□ -1.63
HMGB1P33-201ENST00000563485 PRSS38A1L453 326 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 GSG1L2A8MUP6 293 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 ALDH1A2O94788 518 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 FKBP9O95302 570 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 ADCYAP1R1P41586 468 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 LSSP48449 732 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 NPEPPSP55786 919 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 PHC1P78364 1004 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 OCRLQ01968 901 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 TOB2Q14106 344 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 TERF2Q15554 542 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 FAM214AQ32MH5 1076 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 C1QL3Q5VWW1 255 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 MFSD5Q6N075 450 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 FKBP9P1Q75LS8 142 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 GSPT2Q8IYD1 628 aaKnown RBP4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 UNC5BQ8IZJ1 945 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 AHI1Q8N157 1196 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 CDYL2Q8N8U2 506 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 ZNF610Q8N9Z0 462 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 ATXN2LQ8WWM7 1075 aaKnown RBP4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 PGBD4Q96DM1 585 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 CLIP3Q96DZ5 547 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 FDXACB1Q9BRP7 624 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 MENTQ9BUN1 341 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 REXO2Q9Y3B8 237 aaKnown RBP4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 PPP2R3BQ9Y5P8 575 aa4.83□□□□□ -1.64
HMGB1P33-201ENST00000563485 XDHP47989 1333 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 SEC24DO94855 1032 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 LY86O95711 162 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 CFBP00751 764 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 ADH4P08319 380 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 LSP1P33241 339 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 TGFB2P61812 414 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 NPM2Q86SE8 214 aaKnown RBP4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 CXorf67Q86X51 503 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 AMER2Q8N7J2 671 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 MDGA1Q8NFP4 955 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 GAB3Q8WWW8 586 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 LARP4BQ92615 738 aaKnown RBP4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 MNTQ99583 582 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 ENKD1Q9H0I2 346 aa4.82□□□□□ -1.64
HMGB1P33-201ENST00000563485 A0A087X0B3 334 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 FAM20BO75063 409 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 MFAP3LO75121 409 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 RPS6KA4O75676 772 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 IPO13O94829 963 aaKnown RBP4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 CLEC2LP0C7M8 214 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms