RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 COL4A3BPQ9Y5P4 624 aa23.47■■□□□ 1.35
CHD9-208ENST00000563410 FAM205CA6NFA0 338 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 DKC1O60832 514 aaKnown RBP eCLIP23.46■■□□□ 1.352e-6■■■□□ 16.1
CHD9-208ENST00000563410 SKIP12755 728 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 SPIRE1Q08AE8 756 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 EPHA7Q15375 998 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 TRIM67Q6ZTA4 783 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 BMP8AQ7Z5Y6 402 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 RSPH1Q8WYR4 309 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 CEP170P1Q96L14 293 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 MFSD14AQ96MC6 490 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 FBXL18Q96ME1 805 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 LXNQ9BS40 222 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 KCNH6Q9H252 994 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 NRDE2Q9H7Z3 1164 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 TBC1D13Q9NVG8 400 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 HCFC2Q9Y5Z7 792 aa23.46■■□□□ 1.35
CHD9-208ENST00000563410 CLASP2O75122 1294 aaKnown RBP23.45■■□□□ 1.34
CHD9-208ENST00000563410 ZC3H11AO75152 810 aaKnown RBP eCLIP23.45■■□□□ 1.34
CHD9-208ENST00000563410 OFD1O75665 1012 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 FDPSP14324 419 aaKnown RBP23.45■■□□□ 1.34
CHD9-208ENST00000563410 HOXB8P17481 243 aaPredicted RBP23.45■■□□□ 1.34
CHD9-208ENST00000563410 RAB27AP51159 221 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 C4orf19Q8IY42 314 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 BCL7CQ8WUZ0 217 aaPredicted RBP23.45■■□□□ 1.34
CHD9-208ENST00000563410 PRPF31Q8WWY3 499 aaKnown RBP23.45■■□□□ 1.34
CHD9-208ENST00000563410 SLC7A3Q8WY07 619 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 CASP10Q92851 521 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 TMEM143Q96AN5 459 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 TMEM169Q96HH4 297 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 ZBP1Q9H171 429 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 MINDY3Q9H8M7 445 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 AGPAT5Q9NUQ2 364 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 RGL1Q9NZL6 768 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 ORC3Q9UBD5 711 aaPredicted RBP23.45■■□□□ 1.34
CHD9-208ENST00000563410 CDH22Q9UJ99 828 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 PPME1Q9Y570 386 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 KMT2EQ8IZD2 1858 aa23.45■■□□□ 1.34
CHD9-208ENST00000563410 TMEM221A6NGB7 291 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 M0R296 226 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 POLGP54098 1239 aaPredicted RBP23.44■■□□□ 1.34
CHD9-208ENST00000563410 AK2P54819 239 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 NOMO2Q5JPE7 1267 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 GLB1LQ6UWU2 654 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 TNFRSF25Q93038 417 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 DYDC2Q96IM9 177 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 NAP1L4Q99733 375 aaKnown RBP23.44■■□□□ 1.34
CHD9-208ENST00000563410 BMP2KQ9NSY1 1161 aaPredicted RBP23.44■■□□□ 1.34
CHD9-208ENST00000563410 INPP5FQ9Y2H2 1132 aa23.44■■□□□ 1.34
CHD9-208ENST00000563410 ZBTB39O15060 712 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 B4GALT3O60512 393 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 CXCL14O95715 111 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 GALTP07902 379 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 HOXA11P31270 313 aaPredicted RBP23.43■■□□□ 1.34
CHD9-208ENST00000563410 YWHABP31946 246 aaKnown RBP23.43■■□□□ 1.34
CHD9-208ENST00000563410 RFC5P40937 340 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 ANAPC15P60006 121 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 LAMTOR4Q0VGL1 99 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 NR5A1Q13285 461 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 NCAPH2Q6IBW4 605 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 AGMOQ6ZNB7 445 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 SRGAP1Q7Z6B7 1085 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 EXOC8Q8IYI6 725 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 VPS52Q8N1B4 723 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 PSPC1Q8WXF1 523 aaKnown RBP23.43■■□□□ 1.34
CHD9-208ENST00000563410 AUTS2Q8WXX7 1259 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 IGSF21Q96ID5 467 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 DNAJB4Q9UDY4 337 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 PCDHB2Q9Y5E7 798 aa23.43■■□□□ 1.34
CHD9-208ENST00000563410 LARGE1O95461 756 aa23.42■■□□□ 1.34
CHD9-208ENST00000563410 SRGAP2CP0DJJ0 459 aa23.42■■□□□ 1.34
CHD9-208ENST00000563410 NHLH1Q02575 133 aa23.42■■□□□ 1.34
CHD9-208ENST00000563410 CTTNQ14247 550 aaKnown RBP23.42■■□□□ 1.34
CHD9-208ENST00000563410 UBXN11Q5T124 520 aa23.42■■□□□ 1.34
CHD9-208ENST00000563410 MRPL10Q7Z7H8 261 aaKnown RBP23.42■■□□□ 1.34
CHD9-208ENST00000563410 DDX53Q86TM3 631 aaKnown RBP23.42■■□□□ 1.34
CHD9-208ENST00000563410 ZNF280BQ86YH2 543 aa23.42■■□□□ 1.34
CHD9-208ENST00000563410 IRAK3Q9Y616 596 aa23.42■■□□□ 1.34
CHD9-208ENST00000563410 TDRD15B5MCY1 1934 aaKnown RBP23.41■■□□□ 1.34
CHD9-208ENST00000563410 MARCH6O60337 910 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 CTSAP10619 480 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 CA8P35219 290 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 SLC11A1P49279 550 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 AFF1P51825 1210 aaKnown RBP23.41■■□□□ 1.34
CHD9-208ENST00000563410 CYP4A11Q02928 519 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 EMC2Q15006 297 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 ANKRD1Q15327 319 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 ME3Q16798 604 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 TPRNQ4KMQ1 711 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 ALYREFQ86V81 257 aaKnown RBP23.41■■□□□ 1.34
CHD9-208ENST00000563410 SLFN12Q8IYM2 578 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 NECAB1Q8N987 351 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 WASF1Q92558 559 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 PBXIP1Q96AQ6 731 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 PGBD4Q96DM1 585 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 VN1R3Q9BXE9 311 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 ADAM7Q9H2U9 754 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 ZSWIM4Q9H7M6 989 aa23.41■■□□□ 1.34
CHD9-208ENST00000563410 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.4■■□□□ 1.34
CHD9-208ENST00000563410 CARNS1A5YM72 827 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms