RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SLC11A1P49279 550 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 CLCN3P51790 818 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 NLRP11P59045 1033 aaKnown RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 GPC5P78333 572 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 SHC2P98077 582 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 CSTF1Q05048 431 aaKnown RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 FZD5Q13467 585 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 IMMTQ16891 758 aaKnown RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 RNF169Q8NCN4 708 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 ST13P5Q8NFI4 369 aaPredicted RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 NETO1Q8TDF5 533 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 BBXQ8WY36 941 aaPredicted RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 OSBPL6Q9BZF3 934 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 AGO4Q9HCK5 861 aaKnown RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 PRMT8Q9NR22 394 aaPredicted RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 TBC1D13Q9NVG8 400 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 PCDHA6Q9UN73 950 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 PCDHA8Q9Y5H6 950 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 NUMBLQ9Y6R0 609 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 TICRRQ7Z2Z1 1910 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 CARNS1A5YM72 827 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SHISA7A6NL88 538 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 DARSP14868 501 aaKnown RBP8.79□□□□□ -1
HERPUD1-206ENST00000563343 FGFR4P22455 802 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SPEM2Q0P670 501 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
HERPUD1-206ENST00000563343 TSSK4Q6SA08 328 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 RNF168Q8IYW5 571 aaPredicted RBP8.79□□□□□ -1
HERPUD1-206ENST00000563343 ATRIPQ8WXE1 791 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 RSPH1Q8WYR4 309 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SLC39A7Q92504 469 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 STAMQ92783 540 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 FGF14Q92915 247 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 LPPQ93052 612 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SECISBP2LQ93073 1101 aaKnown RBP8.79□□□□□ -1
HERPUD1-206ENST00000563343 CLDN23Q96B33 292 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SDF4Q9BRK5 362 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 EMILIN2Q9BXX0 1053 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 BCO2Q9BYV7 579 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 IL25Q9H293 177 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 PSTPIP2Q9H939 334 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 LTB4R2Q9NPC1 389 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SH2B1Q9NRF2 756 aaPredicted RBP8.79□□□□□ -1
HERPUD1-206ENST00000563343 ANGPTL2Q9UKU9 493 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 MAFBQ9Y5Q3 323 aaPredicted RBP8.79□□□□□ -1
HERPUD1-206ENST00000563343 AKAP13Q12802 2813 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 EML5Q05BV3 1969 aa8.79□□□□□ -1
HERPUD1-206ENST00000563343 SPAG17Q6Q759 2223 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 GCN1Q92616 2671 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 VWA8A3KMH1 1905 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 LAMA1P25391 3075 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 MEIS1O00470 390 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 DHX15O43143 795 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 OFD1O75665 1012 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 DDHD2O94830 711 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 SSBP05455 408 aaKnown RBP eCLIP8.78□□□□□ -1
HERPUD1-206ENST00000563343 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 TARSP26639 723 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 SMARCA1P28370 1054 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 MAGEA9P43362 315 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 PHKA2P46019 1235 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 GPC3P51654 580 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 PRKCQQ04759 706 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 MLF2Q15773 248 aaPredicted RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 NOMO2Q5JPE7 1267 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 ANKRD45Q5TZF3 282 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 FAM160B1Q5W0V3 765 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 PARM1Q6UWI2 310 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 CWC27Q6UX04 472 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 ZNF280BQ86YH2 543 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 SRBD1Q8N5C6 995 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 SMG7Q92540 1137 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 RRP36Q96EU6 259 aaKnown RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 SHDQ96IW2 340 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 ZNF668Q96K58 619 aaPredicted RBP8.78□□□□□ -1
HERPUD1-206ENST00000563343 RPS6KC1Q96S38 1066 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 MAP3K14Q99558 947 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 RXFP1Q9HBX9 757 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 ZNF302Q9NR11 478 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.78□□□□□ -1
HERPUD1-206ENST00000563343 RCAN3Q9UKA8 241 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 TAF6LQ9Y6J9 622 aa8.78□□□□□ -1
HERPUD1-206ENST00000563343 IGF2RP11717 2491 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 ITPR1Q14643 2758 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 SPDYE3A6NKU9 549 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 FAM170BA6NMN3 283 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 DDX39AO00148 427 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 IFIT3O14879 490 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 TM4SF5O14894 197 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 TEX28O15482 410 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 GDF9O60383 454 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 LRP3O75074 770 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 PLEKHA8P1O95397 391 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 PROS1P07225 676 aa8.77□□□□□ -1.01
HERPUD1-206ENST00000563343 MYBP10242 640 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms