RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DKC1O60832 514 aaKnown RBP eCLIP20.82■□□□□ 0.92
SMPD3-203ENST00000563226 SEC31AO94979 1220 aaKnown RBP20.82■□□□□ 0.92
SMPD3-203ENST00000563226 UBA1P22314 1058 aaKnown RBP20.82■□□□□ 0.92
SMPD3-203ENST00000563226 SMTNP53814 917 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 SLC39A4Q6P5W5 647 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 L3MBTL3Q96JM7 780 aaPredicted RBP20.82■□□□□ 0.92
SMPD3-203ENST00000563226 PDE2AO00408 941 aaPredicted RBP20.81■□□□□ 0.92
SMPD3-203ENST00000563226 CXCL11O14625 94 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 NCK2O43639 380 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 DGAT1O75907 488 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 EDNRBP24530 442 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 USP50Q70EL3 339 aaPredicted RBP20.81■□□□□ 0.92
SMPD3-203ENST00000563226 OLIG1Q8TAK6 271 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 SPIRE2Q8WWL2 714 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 SAAL1Q96ER3 474 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 PNKPQ96T60 521 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 SNX12Q9UMY4 172 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 KCNH4Q9UQ05 1017 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 ATG7O95352 703 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 NF2P35240 595 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 GCLMP48507 274 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 DRAP1Q14919 205 aaPredicted RBP20.81■□□□□ 0.92
SMPD3-203ENST00000563226 KIAA0753Q2KHM9 967 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 PHLDB3Q6NSJ2 640 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 CBWD2Q8IUF1 395 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 SLC17A8Q8NDX2 589 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 OPTNQ96CV9 577 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 NOX5Q96PH1 765 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 ALS2CR12Q96Q35 445 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 NTPCRQ9BSD7 190 aaKnown RBP20.81■□□□□ 0.92
SMPD3-203ENST00000563226 ATP6V0A4Q9HBG4 840 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 ARGLU1Q9NWB6 273 aaPredicted RBP20.81■□□□□ 0.92
SMPD3-203ENST00000563226 APEX2Q9UBZ4 518 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 AGTPBP1Q9UPW5 1226 aa20.81■□□□□ 0.92
SMPD3-203ENST00000563226 BZW2Q9Y6E2 419 aaKnown RBP20.81■□□□□ 0.92
SMPD3-203ENST00000563226 EVI5O60447 810 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 RHOXF2BP0C7M4 288 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 STAT1P42224 750 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 NAB2Q15742 525 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 XKR3Q5GH77 459 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 EEPD1Q7L9B9 569 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 TXLNBQ8N3L3 684 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 RHOXF2Q9BQY4 288 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 STK33Q9BYT3 514 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 POLR3FQ9H1D9 316 aaPredicted RBP20.8■□□□□ 0.92
SMPD3-203ENST00000563226 ZNF302Q9NR11 478 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 NAGPAQ9UK23 515 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 NENFQ9UMX5 172 aa20.8■□□□□ 0.92
SMPD3-203ENST00000563226 MAFBQ9Y5Q3 323 aaPredicted RBP20.8■□□□□ 0.92
SMPD3-203ENST00000563226 CNGA1P29973 690 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 SOX5P35711 763 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 CBX1P83916 185 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 PPIL2Q13356 520 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 Q3C1V9 767 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 DPY19L2Q6NUT2 758 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 NFRKBQ6P4R8 1299 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 TAS1R3Q7RTX0 852 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 RNF10Q8N5U6 811 aaKnown RBP20.79■□□□□ 0.92
SMPD3-203ENST00000563226 MSANTD4Q8NCY6 345 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 MCPH1Q8NEM0 835 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 COG1Q8WTW3 980 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 HVCN1Q96D96 273 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 LUC7LQ9NQ29 371 aaKnown RBP20.79■□□□□ 0.92
SMPD3-203ENST00000563226 RBPJLQ9UBG7 517 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 EXOC7Q9UPT5 735 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 FARP2O94887 1054 aaPredicted RBP20.79■□□□□ 0.92
SMPD3-203ENST00000563226 ZRANB2O95218 330 aaKnown RBP eCLIP20.79■□□□□ 0.92
SMPD3-203ENST00000563226 PGK2P07205 417 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 FERP16591 822 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 NAP1L1P55209 391 aaKnown RBP20.79■□□□□ 0.92
SMPD3-203ENST00000563226 SNRPFP62306 86 aaKnown RBP20.79■□□□□ 0.92
SMPD3-203ENST00000563226 FGD4Q96M96 766 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 PSMB7Q99436 277 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 PCYT2Q99447 389 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 C17orf75Q9HAS0 396 aa20.79■□□□□ 0.92
SMPD3-203ENST00000563226 MCM3APO60318 1980 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 GSTTP1A0A1W2PQM5 241 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 DDX3XO00571 662 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMPD3-203ENST00000563226 OATP04181 439 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 EMC2Q15006 297 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 SNRNP35Q16560 246 aaKnown RBP20.78■□□□□ 0.92
SMPD3-203ENST00000563226 ARHGAP44Q17R89 818 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 EPC2Q52LR7 807 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 EAPPQ56P03 285 aaPredicted RBP20.78■□□□□ 0.92
SMPD3-203ENST00000563226 CC2D1AQ6P1N0 951 aaPredicted RBP20.78■□□□□ 0.92
SMPD3-203ENST00000563226 TMCO3Q6UWJ1 677 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 ARHGEF19Q8IW93 802 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 LNX1Q8TBB1 728 aaPredicted RBP20.78■□□□□ 0.92
SMPD3-203ENST00000563226 TLR10Q9BXR5 811 aa20.78■□□□□ 0.92
SMPD3-203ENST00000563226 MAPK13O15264 365 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 PALMO75781 387 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 GJA5P36382 358 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 ALKBH5Q6P6C2 394 aaKnown RBP20.77■□□□□ 0.92
SMPD3-203ENST00000563226 ZC3H15Q8WU90 426 aaKnown RBP20.77■□□□□ 0.92
SMPD3-203ENST00000563226 TMEM143Q96AN5 459 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 TMEM117Q9H0C3 514 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 IGKV6D-21A0A0A0MT36 114 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 TULP1O00294 542 aaPredicted RBP20.77■□□□□ 0.92
SMPD3-203ENST00000563226 CXCR5P32302 372 aa20.77■□□□□ 0.92
SMPD3-203ENST00000563226 POLGP54098 1239 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms