RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CRACR2AQ9BSW2 395 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 FAM207AQ9NSI2 230 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-208ENST00000563220 HSPBP1Q9NZL4 362 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 ARHGAP6O43182 974 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 AFPP02771 609 aaKnown RBP19.74■□□□□ 0.75
COMMD4-208ENST00000563220 MMP3P08254 477 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 ZNF286BP0CG31 522 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-208ENST00000563220 PPP2R5AQ15172 486 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 DEFB115Q30KQ5 88 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 TCERG1LQ5VWI1 586 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 IER5Q5VY09 327 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 LRRC71Q8N4P6 559 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 PRPF31Q8WWY3 499 aaKnown RBP19.74■□□□□ 0.75
COMMD4-208ENST00000563220 KCNN1Q92952 543 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 ZBTB10Q96DT7 871 aa19.74■□□□□ 0.75
COMMD4-208ENST00000563220 GNEQ9Y223 722 aaKnown RBP19.74■□□□□ 0.75
COMMD4-208ENST00000563220 LRRIQ4A6NIV6 560 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 H0YCG3 227 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 DYNC1LI2O43237 492 aaPredicted RBP19.73■□□□□ 0.75
COMMD4-208ENST00000563220 ALDH1A1P00352 501 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 IRF5Q13568 498 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 CAPSQ13938 189 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 CCAR2Q8N163 923 aaKnown RBP19.73■□□□□ 0.75
COMMD4-208ENST00000563220 OR8K1Q8NGG5 319 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 DEPTORQ8TB45 409 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 CAPNS2Q96L46 248 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 DNAJC7Q99615 494 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 KCND1Q9NSA2 647 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 TRMT1Q9NXH9 659 aaKnown RBP19.73■□□□□ 0.75
COMMD4-208ENST00000563220 A0A1W2PQJ5 194 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 SOWAHDA6NJG2 315 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 INSRRP14616 1297 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 PSMC4P43686 418 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 XXYLT1Q8NBI6 393 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 NAA15Q9BXJ9 866 aaKnown RBP19.73■□□□□ 0.75
COMMD4-208ENST00000563220 USP20Q9Y2K6 914 aa19.73■□□□□ 0.75
COMMD4-208ENST00000563220 NOL4O94818 638 aa19.72■□□□□ 0.75
COMMD4-208ENST00000563220 ZBED6P86452 979 aa19.72■□□□□ 0.75
COMMD4-208ENST00000563220 APBA1Q02410 837 aa19.72■□□□□ 0.75
COMMD4-208ENST00000563220 MTF1Q14872 753 aa19.72■□□□□ 0.75
COMMD4-208ENST00000563220 BRDTQ58F21 947 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-208ENST00000563220 EXOC8Q8IYI6 725 aa19.72■□□□□ 0.75
COMMD4-208ENST00000563220 LENG1Q96BZ8 264 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-208ENST00000563220 GOLGA8IPA6NC78 632 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 GOLGA8JA6NMD2 632 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 H3BRB1 525 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 GAS2O43903 313 aaKnown RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 ZNF484Q5JVG2 852 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 DPY19L2P1Q6NXN4 242 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 WDR59Q6PJI9 974 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 RAD9BQ6WBX8 426 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 TCP11Q8WWU5 503 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 IQCDQ96DY2 449 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 LSM14BQ9BX40 385 aaKnown RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 TUT1Q9H6E5 874 aaKnown RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 K7ERI5 159 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 ADCY3O60266 1144 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 C22orf31O95567 290 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 ABCD1P33897 745 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 FCGRTP55899 365 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 IGBP1P78318 339 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 IRX5P78411 483 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 LACTBP83111 547 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 LAMTOR4Q0VGL1 99 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 DGKDQ16760 1214 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 EFCAB12Q6NXP0 572 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 TOGARAM2Q6ZUX3 1019 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 NEK11Q8NG66 645 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 PSPC1Q8WXF1 523 aaKnown RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 CHP1Q99653 195 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 JPH2Q9BR39 696 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 CREBZFQ9NS37 354 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 SUCLA2Q9P2R7 463 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-208ENST00000563220 GABRQQ9UN88 632 aa19.71■□□□□ 0.75
COMMD4-208ENST00000563220 A6NJR5 290 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 HNRNPDLO14979 420 aaKnown RBP19.7■□□□□ 0.74
COMMD4-208ENST00000563220 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 EDN1P05305 212 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 GJB1P08034 283 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 TRIM49P0CI25 452 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 TRIM49CP0CI26 452 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 SLC9A1P19634 815 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 CAP1Q01518 475 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 BFSP1Q12934 665 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 TMTC1Q8IUR5 882 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 SAAL1Q96ER3 474 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 BICD1Q96G01 975 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 TMEM134Q9H6X4 195 aa19.7■□□□□ 0.74
COMMD4-208ENST00000563220 SRGAP2CP0DJJ0 459 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 KLRC1P26715 233 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 CLCN3P51790 818 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 DLG4P78352 724 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 STRN3Q13033 797 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 MXD4Q14582 209 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-208ENST00000563220 CBWD2Q8IUF1 395 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 METTL13Q8N6R0 699 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 ZNF397Q8NF99 534 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-208ENST00000563220 PLEKHO2Q8TD55 490 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 POMGNT1Q8WZA1 660 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms