RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 LOC285556D6RIA3 1793 aa23.2■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PFASO15067 1338 aa23.2■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 H0YCG3 227 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 RGS20O76081 388 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 NPTX2P47972 431 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 C2orf54Q08AI8 447 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 STXBP2Q15833 593 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SPATA4Q8NEY3 305 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SH2D3AQ9BRG2 576 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 CSADQ9Y600 493 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 GRID2IPA4D2P6 1211 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 EIF3JO75822 258 aaKnown RBP23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 STBD1O95210 358 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ACTR2P61160 394 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 FAM193AP78312 1265 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 VGLL4Q14135 290 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SWSAP1Q6NVH7 229 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 UBXN6Q9BZV1 441 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ADARB2Q9NS39 739 aaKnown RBP23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 DDX3XO00571 662 aaKnown RBP eCLIP23.18■■□□□ 1.34e-8■■■□□ 19.1
VPS9D1-AS1-202ENST00000562866 CES2O00748 559 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ZNF862O60290 1169 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ICAM3P32942 547 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PRKG1Q13976 671 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ABHD15Q6UXT9 468 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 TRMT1LQ7Z2T5 733 aaKnown RBP23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 LMO3Q8TAP4 145 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 TAF4BQ92750 862 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ACBD3Q9H3P7 528 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 USP20Q9Y2K6 914 aa23.18■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 DENND3A2RUS2 1198 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 TISP43B9A030 160 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 NOP2P46087 812 aaKnown RBP23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SMC1AQ14683 1233 aaKnown RBP23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 USP37Q86T82 979 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SLC30A5Q8TAD4 765 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 U2AF1L4Q8WU68 220 aaKnown RBP23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 DCPSQ96C86 337 aaKnown RBP23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ATP6V0A4Q9HBG4 840 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SEPT9Q9UHD8 586 aaPredicted RBP23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 FTCDO95954 541 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SUPT20HL2P0C7V6 817 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SCP2P22307 547 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 CXCR5P32302 372 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PRKCEQ02156 737 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 KIF22Q14807 665 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 EPC2Q52LR7 807 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 XKR3Q5GH77 459 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ANKRD35Q8N283 1001 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 IFT74Q96LB3 600 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 GPR88Q9GZN0 384 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 CYP26B1Q9NR63 512 aa23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 RNF216Q9NWF9 866 aaPredicted RBP23.17■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 DLG4P78352 724 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ENPEPQ07075 957 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PPP3CAQ08209 521 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PHLDB3Q6NSJ2 640 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 LBX2Q6XYB7 198 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 RIOX2Q8IUF8 465 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SULF1Q8IWU6 871 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SYCE1Q8N0S2 351 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PSMB7Q99436 277 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PDLIM7Q9NR12 457 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 IGSF9BQ9UPX0 1349 aa23.16■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 GOLGB1Q14789 3259 aaKnown RBP23.15■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 MXI1P50539 228 aa23.15■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 RPS6KA1Q15418 735 aa23.15■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SNRNP35Q16560 246 aaKnown RBP23.15■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 GLE1Q53GS7 698 aaKnown RBP23.15■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 LNX1Q8TBB1 728 aaPredicted RBP23.15■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 TNFAIP3P21580 790 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 CNGA1P29973 690 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 IREB2P48200 963 aaKnown RBP23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 GCLMP48507 274 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 ARHGAP44Q17R89 818 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 C1orf220Q5T0J3 134 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 CCDC60Q8IWA6 550 aaPredicted RBP23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 TMC2Q8TDI7 906 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PBKQ96KB5 322 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 SYT11Q9BT88 431 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 UBE2TQ9NPD8 197 aaPredicted RBP23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 PRDM10Q9NQV6 1147 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 KIAA1217Q5T5P2 1943 aa23.14■■□□□ 1.3
VPS9D1-AS1-202ENST00000562866 MYH10P35580 1976 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ARID2Q68CP9 1835 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ANKRD63C9JTQ0 380 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TMEM253P0C7T8 217 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CASP8Q14790 479 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 LRRC57Q8N9N7 239 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TPCN2Q8NHX9 752 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 BSNDQ8WZ55 320 aa23.14■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 NCANO14594 1321 aa23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GTF2H1P32780 548 aa23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SP4Q02446 784 aa23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 BRDTQ58F21 947 aaPredicted RBP23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TREML2Q5T2D2 321 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms