RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 SOX13Q9UN79 622 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 USP20Q9Y2K6 914 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 PCDHGA2Q9Y5H1 932 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 SNX8Q9Y5X2 465 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 C17orf113A0A1B0GUU1 675 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 H7C1D1 291 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 AGPSO00116 658 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 STX6O43752 255 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ARIH2O95376 493 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 PIGNO95427 931 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 HEXBP07686 556 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 CALM1P0DP23 149 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 CALM2P0DP24 149 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 CALM3P0DP25 149 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ATP5OP48047 213 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 CENPCQ03188 943 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 LACTB2Q53H82 288 aaPredicted RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ATP6V1E2Q96A05 226 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ALKBH8Q96BT7 664 aaKnown RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 TUBA1CQ9BQE3 449 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 GGNBP2Q9H3C7 697 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ENAMQ9NRM1 1142 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 CLASP1Q7Z460 1538 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ATP10AO60312 1499 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 PABPC1P11940 636 aaKnown RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 ALADP13716 330 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 VPS41P49754 854 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ERFP50548 548 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 GPR85P60893 370 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 GNG11P61952 73 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 TMF1P82094 1093 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 DHX9Q08211 1270 aaKnown RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 Q3ZCU0 254 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ARHGAP36Q6ZRI8 547 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 CRACR2BQ8N4Y2 399 aaPredicted RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 PDZD8Q8NEN9 1154 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 PJA1Q8NG27 643 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 IQCDQ96DY2 449 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 KATNAL1Q9BW62 490 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 HEMGNQ9BXL5 484 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 SENP1Q9P0U3 644 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 PRKAG2Q9UGJ0 569 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ZMYND8Q9ULU4 1186 aaPredicted RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 HBS1LQ9Y450 684 aaKnown RBP10.05□□□□□ -0.8
CDH1-205ENST00000562836 PCDHGA11Q9Y5H2 935 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ZNF521Q96K83 1311 aa10.05□□□□□ -0.8
CDH1-205ENST00000562836 ERVV-2B6SEH9 535 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 TK2O00142 265 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 KRT75O95678 551 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 PTPN2P17706 415 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 TNFAIP3P21580 790 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 CDC27P30260 824 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 NKX2-5P52952 324 aaPredicted RBP10.04□□□□□ -0.8
CDH1-205ENST00000562836 CDK18Q07002 472 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 CYLC2Q14093 348 aaPredicted RBP10.04□□□□□ -0.8
CDH1-205ENST00000562836 EPHA7Q15375 998 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 CAMK4Q16566 473 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 CCDC58Q4VC31 144 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 LRRC34Q8IZ02 419 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 EHBP1Q8NDI1 1231 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 SHCBP1Q8NEM2 672 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 FNDC8Q8TC99 324 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 HDAC2Q92769 488 aaKnown RBP10.04□□□□□ -0.8
CDH1-205ENST00000562836 LLPHQ9BRT6 129 aaKnown RBP10.04□□□□□ -0.8
CDH1-205ENST00000562836 DBNDD1Q9H9R9 158 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 H7C0C1 242 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 FKBP9O95302 570 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 CYP17A1P05093 508 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 SELLP14151 372 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 CD86P42081 329 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 ECE1P42892 770 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 PTPN9P43378 593 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 COPB1P53618 953 aaKnown RBP10.04□□□□□ -0.8
CDH1-205ENST00000562836 GSDMDP57764 484 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 SPIDRQ14159 915 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
CDH1-205ENST00000562836 RASSF3Q86WH2 238 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 GALNT13Q8IUC8 556 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 RMDN1Q96DB5 314 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 PPP1R36Q96LQ0 422 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 TIPINQ9BVW5 301 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 PCDHB4Q9Y5E5 795 aa10.04□□□□□ -0.8
CDH1-205ENST00000562836 MCF2LO15068 1137 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 PPIP5K2O43314 1243 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 ADCY3O60266 1144 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 PIP5K1CO60331 668 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 GNA11P29992 359 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 PRKAR1BP31321 381 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 PCYT1AP49585 367 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 EMP3P54852 163 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 GUCY1A3Q02108 690 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 LMNB2Q03252 620 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms