RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 KANK3Q6NY19 840 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 CNNM4Q6P4Q7 775 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 CATSPER4Q7RTX7 472 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 MYCT1Q8N699 235 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 BSNDQ8WZ55 320 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 C7orf25Q9BPX7 421 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 ZHX3Q9H4I2 956 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 KMT5AQ9NQR1 393 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 RNF216Q9NWF9 866 aaPredicted RBP18.07■□□□□ 0.48
USB1-206ENST00000562534 K7ERI5 159 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
USB1-206ENST00000562534 MYL1P05976 194 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 AXLP30530 894 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 ABCD1P33897 745 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 UBE2HP62256 183 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 C9orf50Q5SZB4 431 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 RASIP1Q5U651 963 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 CDCA2Q69YH5 1023 aaPredicted RBP18.06■□□□□ 0.48
USB1-206ENST00000562534 SLC17A8Q8NDX2 589 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 CNNM3Q8NE01 707 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 PHOSPHO2Q8TCD6 241 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 STAMQ92783 540 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 PAGE5Q96GU1 130 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
USB1-206ENST00000562534 GOLPH3LQ9H4A5 285 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 TMEM134Q9H6X4 195 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 PRMT7Q9NVM4 692 aaPredicted RBP18.06■□□□□ 0.48
USB1-206ENST00000562534 SEL1LQ9UBV2 794 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 COLQQ9Y215 455 aaPredicted RBP18.06■□□□□ 0.48
USB1-206ENST00000562534 SLC4A7Q9Y6M7 1214 aa18.06■□□□□ 0.48
USB1-206ENST00000562534 SCN5AQ14524 2016 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 DENND3A2RUS2 1198 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 ZBBXA8MT70 800 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 ACTN4O43707 911 aaKnown RBP18.05■□□□□ 0.48
USB1-206ENST00000562534 TRAK2O60296 914 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 ERLIN2O94905 339 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 GAP43P17677 238 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 AFMP43652 599 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 KCNJ6P48051 423 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
USB1-206ENST00000562534 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 MAPK6Q16659 721 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 FAM187BQ17R55 369 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 KRBA2Q6ZNG9 492 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 CCDC65Q8IXS2 484 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 FMR1NBQ8N0W7 255 aaPredicted RBP18.05■□□□□ 0.48
USB1-206ENST00000562534 PRIMPOLQ96LW4 560 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 TRIM9Q9C026 710 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 FZD8Q9H461 694 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 RGS18Q9NS28 235 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 DACT1Q9NYF0 836 aa18.05■□□□□ 0.48
USB1-206ENST00000562534 TANC1Q9C0D5 1861 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 AMHP03971 560 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 MAPTP10636 758 aaKnown RBP18.04■□□□□ 0.48
USB1-206ENST00000562534 IDEP14735 1019 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 FGFR4P22455 802 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 MBTD1Q05BQ5 628 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 TCTN1Q2MV58 587 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 SLC24A5Q71RS6 500 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 RTN4RL1Q86UN2 441 aaPredicted RBP18.04■□□□□ 0.48
USB1-206ENST00000562534 ENGASEQ8NFI3 743 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 TIGD1Q96MW7 591 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 ADAM2Q99965 735 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
USB1-206ENST00000562534 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 PANK4Q9NVE7 773 aa18.04■□□□□ 0.48
USB1-206ENST00000562534 CEP290O15078 2479 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 PVALEFA0A1B0GWK0 134 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 ACKR2O00590 384 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 SLC16A4O15374 487 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 GADD45BO75293 160 aaPredicted RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 SNW1Q13573 536 aaKnown RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 DSC3Q14574 896 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 HERC4Q5GLZ8 1057 aaPredicted RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 HAUS6Q7Z4H7 955 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 FAM178BQ8IXR5 827 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 KCNN1Q92952 543 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 AGPAT5Q9NUQ2 364 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 ARHGAP28Q9P2N2 729 aa18.03■□□□□ 0.48
USB1-206ENST00000562534 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
USB1-206ENST00000562534 TET1Q8NFU7 2136 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.02■□□□□ 0.48
USB1-206ENST00000562534 FRMD3A2A2Y4 597 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 SKIP12755 728 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 HOXA11P31270 313 aaPredicted RBP18.02■□□□□ 0.48
USB1-206ENST00000562534 NCKAP1LP55160 1127 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 ASIC1P78348 528 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 FAM189BP81408 668 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 STRN3Q13033 797 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms