RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 UBR7Q8N806 425 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 C7orf31Q8N865 590 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 RASGRP4Q8TDF6 673 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 SSH3Q8TE77 659 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 GTF3C2Q8WUA4 911 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 WFDC12Q8WWY7 111 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CLIP3Q96DZ5 547 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 RADILQ96JH8 1075 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 MFSD14AQ96MC6 490 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 SETDB2Q96T68 719 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 NTPCRQ9BSD7 190 aaKnown RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 BRD8Q9H0E9 1235 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 NSRP1Q9H0G5 558 aaKnown RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 TRPV4Q9HBA0 871 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 PICK1Q9NRD5 415 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 TOMM22Q9NS69 142 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 KLHL11Q9NVR0 708 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 PPP1R14DQ9NXH3 145 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 RRN3Q9NYV6 651 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 HDAC6Q9UBN7 1215 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ADAMTS1Q9UHI8 967 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CROTQ9UKG9 612 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ITGB1BP2Q9UKP3 347 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 HPCAL4Q9UM19 191 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 MSRB2Q9Y3D2 182 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 SLC4A4Q9Y6R1 1079 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 FAM135BQ49AJ0 1406 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 hCG_1642624A0A1W2PR95 340 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 UBAP1LF5GYI3 381 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 GOLGA6L19H0YKK7 550 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 AREL1O15033 823 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DDX3YO15523 660 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 TTI1O43156 1089 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 TSPAN1O60635 241 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DKC1O60832 514 aaKnown RBP eCLIP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DAB1O75553 588 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DGKIO75912 1065 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 ASMTLO95671 621 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 OLFM2O95897 454 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DNTTP04053 509 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 PYGLP06737 847 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 THEGLP0DJG4 465 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 ZSCAN22P10073 491 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 PECAM1P16284 738 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 NR2C2P49116 596 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 CLCN2P51788 898 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 GPLD1P80108 840 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 BASP1P80723 227 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 PPIDQ08752 370 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 MTMR1Q13613 665 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DPYSQ14117 519 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 SLC9A5Q14940 896 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 C21orf62-AS1Q17RA5 79 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 COX20Q5RI15 118 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 GDF6Q6KF10 455 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 LIN54Q6MZP7 749 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 ENOSF1Q7L5Y1 443 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 SPATA21Q7Z572 469 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 SMYD1Q8NB12 490 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 FBXO30Q8TB52 745 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 MDM1Q8TC05 714 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 UTP15Q8TED0 518 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 HDAC2Q92769 488 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 CDKL2Q92772 493 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 GCC1Q96CN9 775 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 DDX11Q96FC9 970 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 MYO19Q96H55 970 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 COG3Q96JB2 828 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 ASB2Q96Q27 587 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 PLEKHF1Q96S99 279 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 EDEM3Q9BZQ6 932 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 MMADHCQ9H3L0 296 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 C14orf93Q9H972 538 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 ZFP64Q9NPA5 681 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 TLR7Q9NYK1 1049 aaKnown RBP6.02□□□□□ -1.45
CAPN3-211ENST00000562199 FRRS1LQ9P0K9 344 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 CCDC39Q9UFE4 941 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 CARD8Q9Y2G2 431 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 GPR52Q9Y2T5 361 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 SNX8Q9Y5X2 465 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 ABCC3O15438 1527 aa6.02□□□□□ -1.45
CAPN3-211ENST00000562199 SOS1Q07889 1333 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 NPATQ14207 1427 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 A0A087X0B3 334 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 LOC102724428A0A0B4J2F2 783 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 EYA2O00167 538 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 AP3B1O00203 1094 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CACNB4O00305 520 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ABLIM1O14639 778 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 PMM2O15305 246 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CEP104O60308 925 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 MMP20O60882 483 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 TSC22D2O75157 780 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 USP1O94782 785 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ABLIM3O94929 683 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CYP11A1P05108 521 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms