RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HS2ST1Q7LGA3 356 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM20AQ96MK3 541 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 NSRP1Q9H0G5 558 aaKnown RBP15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 ADAM7Q9H2U9 754 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 OLFML3Q9NRN5 406 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.08■□□□□ 0.018e-8■■■■□ 20.8
VPS9D1-202ENST00000561976 POLLQ9UGP5 575 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 STK24Q9Y6E0 443 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 RPTORQ8N122 1335 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 RIMBP2O15034 1052 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 MSH4O15457 936 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 C21orf2O43822 256 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 ATP6V1G2O95670 118 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 CHRNA3P32297 505 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 DRG2P55039 364 aaKnown RBP15.08■□□□□ 0
VPS9D1-202ENST00000561976 ITIH4Q14624 930 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 SLFN13Q68D06 897 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 CCDC25Q86WR0 208 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 RDH13Q8NBN7 331 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 NOD2Q9HC29 1040 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 APEX2Q9UBZ4 518 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 SUFUQ9UMX1 484 aa15.08■□□□□ 0
VPS9D1-202ENST00000561976 POLD1P28340 1107 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 MYL7Q01449 175 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CCDC38Q502W7 563 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 UBAP2Q5T6F2 1119 aaKnown RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 PIGWQ7Z7B1 504 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CROCCP2Q86T23 111 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 TBC1D1Q86TI0 1168 aaPredicted RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 COL23A1Q86Y22 540 aaPredicted RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 TPH2Q8IWU9 490 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 RHOT2Q8IXI1 618 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 TBC1D16Q8TBP0 767 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 DYDC1Q8WWB3 177 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 KRT35Q92764 455 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 LENG9Q96B70 501 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 STMN4Q9H169 189 aaPredicted RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 GRHL1Q9NZI5 618 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 PARP2Q9UGN5 583 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 TULP1O00294 542 aaPredicted RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 EML1O00423 815 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 RASGRF2O14827 1237 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 PTGIRP43119 386 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 SCNN1DP51172 638 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CCDC137Q6PK04 289 aaKnown RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 TRPM8Q7Z2W7 1104 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 FMNL3Q8IVF7 1028 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 PRELID2Q8N945 189 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CYP2W1Q8TAV3 490 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 SYT11Q9BT88 431 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 AMNQ9BXJ7 453 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 GPR88Q9GZN0 384 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 MTFR1LQ9H019 292 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.07■□□□□ 0
VPS9D1-202ENST00000561976 DONSONQ9NYP3 566 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 DBR1Q9UK59 544 aaKnown RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 PTPN22Q9Y2R2 807 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CD2APQ9Y5K6 639 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 ZMYM2Q9UBW7 1377 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 FOXN3O00409 490 aaPredicted RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 PODXLO00592 558 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 EIF3DO15371 548 aaKnown RBP eCLIP15.07■□□□□ 0
VPS9D1-202ENST00000561976 CHMP2AO43633 222 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 RPSAP08865 295 aaKnown RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 MARCKSL1P49006 195 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 SEL1L2Q5TEA6 688 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CCDC105Q8IYK2 499 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CRYGNQ8WXF5 182 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 AGPAT1Q99943 283 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 TAOK3Q9H2K8 898 aa15.07■□□□□ 0
VPS9D1-202ENST00000561976 CNOT7Q9UIV1 285 aaKnown RBP15.07■□□□□ 0
VPS9D1-202ENST00000561976 FAM196BA6NMK8 535 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 MIF4GDA9UHW6 222 aaKnown RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 FTLP02792 175 aaPredicted RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 GSTA1P08263 222 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 HSPA6P17066 643 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 HOXA13P31271 388 aaPredicted RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 GBP1P32455 592 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 GBP2P32456 591 aaPredicted RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 MESDQ14696 234 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 PRR5LQ6MZQ0 368 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 SLC30A10Q6XR72 485 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 TAOK1Q7L7X3 1001 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 SLC20A1Q8WUM9 679 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 MKNK1Q9BUB5 465 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 POLR3CQ9BUI4 534 aaPredicted RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 PARVGQ9HBI0 331 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 CHORDC1Q9UHD1 332 aaPredicted RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 SLC12A4Q9UP95 1085 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 BCS1LQ9Y276 419 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 TAL1P17542 331 aaPredicted RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 TTC27Q6P3X3 843 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 FBXO11Q86XK2 927 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 FAM178BQ8IXR5 827 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 MGARPQ8TDB4 240 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 RBM17Q96I25 401 aaKnown RBP15.06■□□□□ 0
VPS9D1-202ENST00000561976 GGT7Q9UJ14 662 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms