RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 OFD1O75665 1012 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 CTSAP10619 480 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 INF2Q27J81 1249 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 LLGL2Q6P1M3 1020 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 CPLX2Q6PUV4 134 aaKnown RBP16.31■□□□□ 0.2
SPG7-205ENST00000561945 MRPL10Q7Z7H8 261 aaKnown RBP16.31■□□□□ 0.2
SPG7-205ENST00000561945 TMEM173Q86WV6 379 aaPredicted RBP16.31■□□□□ 0.2
SPG7-205ENST00000561945 EXOC8Q8IYI6 725 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 HAS1Q92839 578 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 IGSF21Q96ID5 467 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 PHOX2BQ99453 314 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 SH2D3AQ9BRG2 576 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 WRAP73Q9P2S5 460 aaPredicted RBP16.31■□□□□ 0.2
SPG7-205ENST00000561945 STK39Q9UEW8 545 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
SPG7-205ENST00000561945 DDX11L8A8MPP1 907 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 P4HBP07237 508 aaKnown RBP16.3■□□□□ 0.2
SPG7-205ENST00000561945 GALTP07902 379 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 NUBP1P53384 320 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 SCRN1Q12765 414 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
SPG7-205ENST00000561945 NOMO2Q5JPE7 1267 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 IER5LQ5T953 404 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 TWF2Q6IBS0 349 aaKnown RBP16.3■□□□□ 0.2
SPG7-205ENST00000561945 GLB1LQ6UWU2 654 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 KSR1Q8IVT5 923 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 SLC22A17Q8WUG5 538 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 NAP1L4Q99733 375 aaKnown RBP16.3■□□□□ 0.2
SPG7-205ENST00000561945 DZANK1Q9NVP4 752 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 PIN4Q9Y237 131 aaKnown RBP16.3■□□□□ 0.2
SPG7-205ENST00000561945 CACNA1HO95180 2353 aa16.3■□□□□ 0.2
SPG7-205ENST00000561945 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 INPPL1O15357 1258 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 GAS2O43903 313 aaKnown RBP16.29■□□□□ 0.2
SPG7-205ENST00000561945 CDKL5O76039 1030 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 CXCL14O95715 111 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
SPG7-205ENST00000561945 RFC5P40937 340 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 MTHFRP42898 656 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 PTPN5P54829 565 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 TCF15Q12870 199 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 EPHA7Q15375 998 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 LETM2Q2VYF4 491 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 PLA2G4FQ68DD2 849 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 CES5AQ6NT32 575 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 AGMOQ6ZNB7 445 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 SUGP1Q8IWZ8 645 aaKnown RBP16.29■□□□□ 0.2
SPG7-205ENST00000561945 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
SPG7-205ENST00000561945 BCL7CQ8WUZ0 217 aaPredicted RBP16.29■□□□□ 0.2
SPG7-205ENST00000561945 SLC7A3Q8WY07 619 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 LPPQ93052 612 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 PGBD4Q96DM1 585 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 VN1R3Q9BXE9 311 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 PDRG1Q9NUG6 133 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 COL4A3BPQ9Y5P4 624 aa16.29■□□□□ 0.2
SPG7-205ENST00000561945 CNTNAP2Q9UHC6 1331 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 B4GALT3O60512 393 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 PFKFB2O60825 505 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 LILRB3O75022 631 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 ZC3H11AO75152 810 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPG7-205ENST00000561945 EFEMP2O95967 443 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 NPEPPSP55786 919 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 PCBP1Q15365 356 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPG7-205ENST00000561945 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 KIAA1841Q6NSI8 718 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 CATSPER4Q7RTX7 472 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 UBALD2Q8IYN6 164 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 ZDHHC14Q8IZN3 488 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 PRPF31Q8WWY3 499 aaKnown RBP16.28■□□□□ 0.2
SPG7-205ENST00000561945 RIPOR3Q96MK2 946 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 NLRP4Q96MN2 994 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 MINDY3Q9H8M7 445 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 DNAJB4Q9UDY4 337 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 CDH22Q9UJ99 828 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 USTQ9Y2C2 406 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 PCDHB2Q9Y5E7 798 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 VPS13AQ96RL7 3174 aa16.28■□□□□ 0.2
SPG7-205ENST00000561945 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 ASAP2O43150 1006 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 SLC11A1P49279 550 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 STK3Q13188 491 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 PTPN14Q15678 1187 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 PPFIBP1Q86W92 1011 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
SPG7-205ENST00000561945 TCP11Q8WWU5 503 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 PSPC1Q8WXF1 523 aaKnown RBP16.27■□□□□ 0.2
SPG7-205ENST00000561945 TNFRSF25Q93038 417 aa16.27■□□□□ 0.2
SPG7-205ENST00000561945 LARP6Q9BRS8 491 aaKnown RBP16.27■□□□□ 0.2
SPG7-205ENST00000561945 TMEM175Q9BSA9 504 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms