RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 FPR2P25090 351 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 ARL4AP40617 200 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 ZNF460Q14592 562 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 KIR3DS1Q14943 382 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 LRRC24Q50LG9 513 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 CCDC93Q567U6 631 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 UBE2R2Q712K3 238 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-220ENST00000561253 NLRX1Q86UT6 975 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 CABP7Q86V35 215 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 ANKRD18AQ8IVF6 992 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 PPARGC1AQ9UBK2 798 aaKnown RBP7.33□□□□□ -1.24
LRRC28-220ENST00000561253 POLLQ9UGP5 575 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 HDAC5Q9UQL6 1122 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 EYA2O00167 538 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 SRGAP3O43295 1099 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 PPP1R11O60927 126 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-220ENST00000561253 CIAO1O76071 339 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 MSL3P1P0C860 447 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 FGFR2P21802 821 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 NEK4P51957 841 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 CHRNDQ07001 517 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 GPR162Q16538 588 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 CCDC57Q2TAC2 916 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 BICRALQ6AI39 1079 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 LDHAL6AQ6ZMR3 332 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 C15orf52Q6ZUT6 534 aaKnown RBP7.32□□□□□ -1.24
LRRC28-220ENST00000561253 NBPF11Q86T75 865 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 DDX53Q86TM3 631 aaKnown RBP7.32□□□□□ -1.24
LRRC28-220ENST00000561253 RTKN2Q8IZC4 609 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 EXOC6Q8TAG9 804 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 TBC1D16Q8TBP0 767 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 KIRREL1Q96J84 757 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 MTA3Q9BTC8 594 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 TARS2Q9BW92 718 aaKnown RBP7.32□□□□□ -1.24
LRRC28-220ENST00000561253 IPPKQ9H8X2 491 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 CRTAC1Q9NQ79 661 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
LRRC28-220ENST00000561253 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
LRRC28-220ENST00000561253 XDHP47989 1333 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 A0A1B0GUL6 1792 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 A0A087X0B3 334 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 GSTA4O15217 222 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 SASH1O94885 1247 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 EFEMP2O95967 443 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 JMJD7P0C870 316 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 PNLIPP16233 465 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 KLRK1P26718 216 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 IGHMBP2P38935 993 aaKnown RBP7.31□□□□□ -1.24
LRRC28-220ENST00000561253 GALK1P51570 392 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 KIAA2012Q0VF49 1180 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 CFAP100Q494V2 611 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 FAM47CQ5HY64 1035 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 THNSL2Q86YJ6 484 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 RPAP2Q8IXW5 612 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-220ENST00000561253 AHI1Q8N157 1196 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 Q8N1Y9 231 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 PPM1KQ8N3J5 372 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 PCDH19Q8TAB3 1148 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 PLEKHO2Q8TD55 490 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 DDX1Q92499 740 aaKnown RBP7.31□□□□□ -1.24
LRRC28-220ENST00000561253 FBXW5Q969U6 566 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 KCNJ15Q99712 375 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 JAM3Q9BX67 310 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 RNF32Q9H0A6 362 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 TAOK3Q9H2K8 898 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-220ENST00000561253 X6R8D5 127 aa7.31□□□□□ -1.24
LRRC28-220ENST00000561253 SBF1O95248 1867 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CACNA1SQ13698 1873 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 TAF5LO75529 589 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 DGKIO75912 1065 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 PDE8BO95263 885 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CNGA1P29973 690 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CT47A1Q5JQC4 288 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-220ENST00000561253 MROH9Q5TGP6 573 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 ZCCHC8Q6NZY4 707 aaKnown RBP7.3□□□□□ -1.24
LRRC28-220ENST00000561253 DPP8Q6V1X1 898 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-220ENST00000561253 ATG4DQ86TL0 474 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CHAC2Q8WUX2 184 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 SHISA4Q96DD7 197 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 GPR101Q96P66 508 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-220ENST00000561253 VPS33BQ9H267 617 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 EPB41L1Q9H4G0 881 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CAAP1Q9H8G2 361 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 CATSPERZQ9NTU4 200 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 SAMD15Q9P1V8 674 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 FBLN5Q9UBX5 448 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 MAPRE3Q9UPY8 281 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 COQ6Q9Y2Z9 468 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 MED23Q9ULK4 1368 aa7.3□□□□□ -1.24
LRRC28-220ENST00000561253 ZNF804BA4D1E1 1349 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 MROH5Q6ZUA9 1318 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 CCDC66A2RUB6 948 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 YDJCA8MPS7 323 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 GSG1L2A8MUP6 293 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 FZD9O00144 591 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 BIN1O00499 593 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 WNT9AO14904 365 aa7.29□□□□□ -1.24
LRRC28-220ENST00000561253 KPNA6O60684 536 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms