RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 HSPBP1Q9NZL4 362 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 KIF2AO00139 706 aaPredicted RBP18.71■□□□□ 0.59
HDDC3-206ENST00000561036 KIAA0391O15091 583 aaKnown RBP18.71■□□□□ 0.59
HDDC3-206ENST00000561036 PIGRP01833 764 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 SMPD1P17405 629 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 GARTP22102 1010 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 MARK3P27448 753 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 CNGA1P29973 690 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 EFNA5P52803 228 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 STRN3Q13033 797 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 TRIM50Q86XT4 487 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 DEPTORQ8TB45 409 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 APBA2Q99767 749 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 KIFC3Q9BVG8 833 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 FAM207AQ9NSI2 230 aaPredicted RBP18.71■□□□□ 0.59
HDDC3-206ENST00000561036 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 CEP72Q9P209 647 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 GJD2Q9UKL4 321 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 ZHX1Q9UKY1 873 aaPredicted RBP18.71■□□□□ 0.59
HDDC3-206ENST00000561036 ZNF215Q9UL58 517 aaPredicted RBP18.71■□□□□ 0.59
HDDC3-206ENST00000561036 TRPC6Q9Y210 931 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 DAAM1Q9Y4D1 1078 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 ADGRA3Q8IWK6 1321 aa18.71■□□□□ 0.59
HDDC3-206ENST00000561036 TNPO2O14787 897 aaKnown RBP18.7■□□□□ 0.58
HDDC3-206ENST00000561036 IGHA2P01877 340 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 TNFAIP2Q03169 654 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 BFSP1Q12934 665 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 NOGQ13253 232 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 DCAF17Q5H9S7 520 aaPredicted RBP18.7■□□□□ 0.58
HDDC3-206ENST00000561036 TCERG1LQ5VWI1 586 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 GBP6Q6ZN66 633 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 OR6J1Q8NGC5 347 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 PSPC1Q8WXF1 523 aaKnown RBP18.7■□□□□ 0.58
HDDC3-206ENST00000561036 SYN2Q92777 582 aaPredicted RBP18.7■□□□□ 0.58
HDDC3-206ENST00000561036 PPP1R13BQ96KQ4 1090 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 CBWD1Q9BRT8 395 aa18.7■□□□□ 0.58
HDDC3-206ENST00000561036 LSM14BQ9BX40 385 aaKnown RBP18.7■□□□□ 0.58
HDDC3-206ENST00000561036 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.69■□□□□ 0.58
HDDC3-206ENST00000561036 LRRIQ4A6NIV6 560 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 MAGEB2O15479 319 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 ASAP2O43150 1006 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 ADCY3O60266 1144 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 N4BP1O75113 896 aaKnown RBP18.69■□□□□ 0.58
HDDC3-206ENST00000561036 EXOC3L4Q17RC7 722 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
HDDC3-206ENST00000561036 NYAP1Q6ZVC0 841 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 TAS1R3Q7RTX0 852 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 PRPF31Q8WWY3 499 aaKnown RBP18.69■□□□□ 0.58
HDDC3-206ENST00000561036 FBXL18Q96ME1 805 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 C2orf40Q9H1Z8 148 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 KIAA1586Q9HCI6 787 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 FBXL5Q9UKA1 691 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 MYO6Q9UM54 1294 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 PLAGL2Q9UPG8 496 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 PPP2R2CQ9Y2T4 447 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 STYXL1Q9Y6J8 313 aa18.69■□□□□ 0.58
HDDC3-206ENST00000561036 SOWAHDA6NJG2 315 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 USP27XA6NNY8 438 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 ANKRD63C9JTQ0 380 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 K7ERI5 159 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 HNRNPDLO14979 420 aaKnown RBP18.68■□□□□ 0.58
HDDC3-206ENST00000561036 PMM2O15305 246 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 P4HA2O15460 535 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 NOL4O94818 638 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 MMP3P08254 477 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 CCDC175P0C221 793 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 ADSSP30520 456 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 FMO5P49326 533 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 PTPN14Q15678 1187 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 DGKDQ16760 1214 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 DNTTIP2Q5QJE6 756 aaKnown RBP18.68■□□□□ 0.58
HDDC3-206ENST00000561036 CDCA2Q69YH5 1023 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-206ENST00000561036 SLFN12LQ6IEE8 588 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 SLC39A4Q6P5W5 647 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 WDR59Q6PJI9 974 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 RAD9BQ6WBX8 426 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 CACNA2D4Q7Z3S7 1137 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 CCDC170Q8IYT3 715 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 CCDC155Q8N6L0 562 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 BAP1Q92560 729 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 C16orf70Q9BSU1 422 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 RNPEPQ9H4A4 650 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 PCIF1Q9H4Z3 704 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 TRMT1Q9NXH9 659 aaKnown RBP18.68■□□□□ 0.58
HDDC3-206ENST00000561036 Q9Y3F1 56 aa18.68■□□□□ 0.58
HDDC3-206ENST00000561036 SIP14410 1827 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 TISP43B9A030 160 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 EPHB6O15197 1021 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 ZNF865P0CJ78 1059 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-206ENST00000561036 PON1P27169 355 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 LIG4P49917 911 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 VAMP7P51809 220 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 FCGRTP55899 365 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 LAMTOR4Q0VGL1 99 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 MKRN4PQ13434 485 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-206ENST00000561036 CAPSQ13938 189 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 TFDP1Q14186 410 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 PDXDC1Q6P996 788 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 USP37Q86T82 979 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms