RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 ZCCHC17Q9NP64 241 aaKnown RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 FTLP02792 175 aaPredicted RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 TBXAS1P24557 533 aaPredicted RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 GPS1Q13098 491 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 PRPF38AQ8NAV1 312 aaKnown RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 FAM213AQ9BRX8 229 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 NDE1Q9NXR1 346 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 TMEM247A6NEH6 219 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 POTECB2RU33 542 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 KRT14P02533 472 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 NPR1P16066 1061 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
SYNM-203ENST00000560674 NAA30Q147X3 362 aaPredicted RBP13.46□□□□□ -0.25
SYNM-203ENST00000560674 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 RUBCNQ92622 972 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 GRAMD1AQ96CP6 724 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 SLC4A7Q9Y6M7 1214 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 SLC16A4O15374 487 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 RAD17O75943 681 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 ANO5Q75V66 913 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 ZBED8Q8IZ13 594 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 GUF1Q8N442 669 aaKnown RBP13.46□□□□□ -0.25
SYNM-203ENST00000560674 FAM167AQ96KS9 214 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 FBXL5Q9UKA1 691 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 SLC8A2Q9UPR5 921 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 HNRNPCL2B2RXH8 293 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 HNRNPCL1O60812 293 aaKnown RBP13.46□□□□□ -0.25
SYNM-203ENST00000560674 DIAPH2O60879 1101 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 GH2P01242 217 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 DHX34Q14147 1143 aaKnown RBP13.46□□□□□ -0.25
SYNM-203ENST00000560674 CATSPER4Q7RTX7 472 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 NDUFAF2Q8N183 169 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 ATP11CQ8NB49 1132 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
SYNM-203ENST00000560674 KRT7P08729 469 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 CDC27P30260 824 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.26
SYNM-203ENST00000560674 GRM4Q14833 912 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 LRRC14Q15048 493 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 MAPK6Q16659 721 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 BCORL1Q5H9F3 1711 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 PFASO15067 1338 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 NEO1Q92859 1461 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 DYNC1I2Q13409 638 aaKnown RBP13.46□□□□□ -0.26
SYNM-203ENST00000560674 TTC8Q8TAM2 541 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 DDX56Q9NY93 547 aaKnown RBP13.46□□□□□ -0.26
SYNM-203ENST00000560674 SEL1LQ9UBV2 794 aa13.46□□□□□ -0.26
SYNM-203ENST00000560674 EFTUD2Q15029 972 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNM-203ENST00000560674 PDXDC1Q6P996 788 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 NUDCD3Q8IVD9 361 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 RHOT1Q8IXI2 618 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 CCNYL1Q8N7R7 359 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L15C9J2P7 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L13C9JLJ4 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L11C9JVI0 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L18D6R9N7 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L22D6RA61 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L17D6RBQ6 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L19D6RCP7 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L20D6RJB6 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 SDC4P31431 198 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 IFNA8P32881 189 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L24Q0WX57 530 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 RFFLQ8WZ73 363 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 FAM167BQ9BTA0 163 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
SYNM-203ENST00000560674 NFKBIAP25963 317 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 GPC3P51654 580 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
SYNM-203ENST00000560674 CAPRIN1Q14444 709 aaKnown RBP13.45□□□□□ -0.26
SYNM-203ENST00000560674 ZNF746Q6NUN9 644 aaPredicted RBP13.45□□□□□ -0.26
SYNM-203ENST00000560674 SNX19Q92543 992 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 TMEM260Q9NX78 707 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
SYNM-203ENST00000560674 HACD3Q9P035 362 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 UNC13BO14795 1591 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 ASAP2O43150 1006 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 GNA15P30679 374 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 RAD23BP54727 409 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 SHC4Q6S5L8 630 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 ANP32DO95626 131 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 ASNSP08243 561 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 KRT76Q01546 638 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 ROR1Q01973 937 aa13.45□□□□□ -0.26
SYNM-203ENST00000560674 HEATR6Q6AI08 1181 aaKnown RBP13.45□□□□□ -0.26
SYNM-203ENST00000560674 RASSF3Q86WH2 238 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms