RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	C14orf93	Q9H972	538 aa	Known RBP	5.53	□□□□□ -1.52
SLTM-223	ENST00000560532	TRPM5	Q9NZQ8	1165 aa		5.53	□□□□□ -1.52
SLTM-223	ENST00000560532	RNF7	Q9UBF6	113 aa		5.53	□□□□□ -1.52
SLTM-223	ENST00000560532	FRMD4B	Q9Y2L6	1034 aa		5.53	□□□□□ -1.52
SLTM-223	ENST00000560532	CCDC85C	A6NKD9	419 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	PDPK1	O15530	556 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	DAPK3	O43293	454 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	APOBEC3A	P31941	199 aa	Predicted RBP	5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	IRF9	Q00978	393 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	ERCC6L	Q2NKX8	1250 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	PRR16	Q569H4	304 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	SLC7A14	Q8TBB6	771 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	SPATA5L1	Q9BVQ7	753 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	EPC1	Q9H2F5	836 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	SYBU	Q9NX95	663 aa		5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.52	□□□□□ -1.53
SLTM-223	ENST00000560532	TMEM200C	A6NKL6	621 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	PROB1	E7EW31	1015 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	NCR1	O76036	304 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	C1R	P00736	705 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	CXCR5	P32302	372 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	KIR2DL3	P43628	341 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	SSRP1	Q08945	709 aa	Known RBP	5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	MTERF2	Q49AM1	385 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	SLFN12L	Q6IEE8	588 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	OVCH1	Q7RTY7	1134 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	ARHGEF19	Q8IW93	802 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	SIMC1	Q8NDZ2	872 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	NELL1	Q92832	810 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	CPEB1	Q9BZB8	566 aa	Known RBP	5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	KCMF1	Q9P0J7	381 aa		5.51	□□□□□ -1.53
SLTM-223	ENST00000560532	KRT37	O76014	449 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	NDUFA10	O95299	355 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	CFB	P00751	764 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	FAM153B	P0C7A2	387 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	SEC24C	P53992	1094 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	FOXI1	Q12951	378 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	PRAMEF9	Q5VWM5	478 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	MICALCL	Q6ZW33	695 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	E2F7	Q96AV8	911 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	EXOC2	Q96KP1	924 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	CELF4	Q9BZC1	486 aa	Known RBP	5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	AKIP1	Q9NQ31	210 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	NDOR1	Q9UHB4	597 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	MSRB2	Q9Y3D2	182 aa		5.5	□□□□□ -1.53
SLTM-223	ENST00000560532	DIAPH1	O60610	1272 aa	Known RBP	5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	STK10	O94804	968 aa	Known RBP	5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	GDF7	Q7Z4P5	450 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	CKAP2L	Q8IYA6	745 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	C2orf69	Q8N8R5	385 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	FAM98A	Q8NCA5	519 aa	Known RBP	5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	LINC00476	Q8WZB0	136 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	MAML3	Q96JK9	1138 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	LRFN3	Q9BTN0	628 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	NDC1	Q9BTX1	674 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	DHRS4	Q9BTZ2	278 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	SLC52A2	Q9HAB3	445 aa		5.49	□□□□□ -1.53
SLTM-223	ENST00000560532	UBA6	A0AVT1	1052 aa	Predicted RBP	5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	UNC119B	A6NIH7	251 aa		5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	RNASET2	O00584	256 aa	Known RBP	5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	HOXA3	O43365	443 aa	Predicted RBP	5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	ELL	P55199	621 aa	Predicted RBP	5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	RASGRF1	Q13972	1273 aa		5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	VPS72	Q15906	364 aa		5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	LCE1A	Q5T7P2	110 aa		5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	BMP8A	Q7Z5Y6	402 aa		5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.48	□□□□□ -1.53
SLTM-223	ENST00000560532	APP	P05067	770 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	HKR1	P10072	659 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	IQSEC1	Q6DN90	963 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	OR52N2	Q8NGI0	321 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	COQ10A	Q96MF6	247 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	UIMC1	Q96RL1	719 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	ING3	Q9NXR8	418 aa		5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	MRPS23	Q9Y3D9	190 aa	Known RBP	5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	COL11A2	P13942	1736 aa	Predicted RBP	5.47	□□□□□ -1.53
SLTM-223	ENST00000560532	MTSS1	O43312	755 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	DNAJC6	O75061	913 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	ZBTB48	P10074	688 aa	Predicted RBP	5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	FNTB	P49356	437 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	KIF11	P52732	1056 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	TTC38	Q5R3I4	469 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	FAM83A	Q86UY5	434 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	SCARB1	Q8WTV0	552 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	SMG7	Q92540	1137 aa	Known RBP	5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	TUBGCP5	Q96RT8	1024 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	LSM14B	Q9BX40	385 aa	Known RBP	5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	HAPLN2	Q9GZV7	340 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	CCDC113	Q9H0I3	377 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	KDM2B	Q8NHM5	1336 aa		5.46	□□□□□ -1.54
SLTM-223	ENST00000560532	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	LEFTY2	O00292	366 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	CTGF	P29279	349 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	RNASE9	P60153	205 aa	Known RBP	5.45	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms