RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 ASAP2O43150 1006 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 DYNC1LI2O43237 492 aaPredicted RBP11.62□□□□□ -0.55
CRTC3-209ENST00000560320 MMP3P08254 477 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 TRIM21P19474 475 aaKnown RBP11.62□□□□□ -0.55
CRTC3-209ENST00000560320 TMOD1P28289 359 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 ARL2P36404 184 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 CPT1AP50416 773 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 LACTBP83111 547 aaPredicted RBP11.62□□□□□ -0.55
CRTC3-209ENST00000560320 KCNA1Q09470 495 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 MAP4K3Q8IVH8 894 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 KSR1Q8IVT5 923 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 TRIM59Q8IWR1 403 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 C12orf56Q8IXR9 622 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 NEK11Q8NG66 645 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 CPLX3Q8WVH0 158 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 PANX2Q96RD6 677 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 C2orf40Q9H1Z8 148 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 KCNF1Q9H3M0 494 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 Q9Y3F1 56 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 ZSWIM8A7E2V4 1837 aa11.62□□□□□ -0.55
CRTC3-209ENST00000560320 RRN3P2A6NIE6 340 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 H3BRB1 525 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 K7ERI5 159 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 KIAA0391O15091 583 aaKnown RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 CCP110O43303 1012 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 AFPP02771 609 aaKnown RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 ZNF865P0CJ78 1059 aaPredicted RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 AKR1A1P14550 325 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 GLRA2P23416 452 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 CYP2C19P33261 490 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 LIG4P49917 911 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 EFNA5P52803 228 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 SP3Q02447 781 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 RBL2Q08999 1139 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 LRMPQ12912 555 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 SYCP1Q15431 976 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 PTPN21Q16825 1174 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 DCAF17Q5H9S7 520 aaPredicted RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 PRAMEF19Q5SWL8 479 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 USP37Q86T82 979 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 TLK2Q86UE8 772 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 XXYLT1Q8NBI6 393 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 BSNDQ8WZ55 320 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 NAA15Q9BXJ9 866 aaKnown RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 TUT1Q9H6E5 874 aaKnown RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 MMRN2Q9H8L6 949 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 SPC25Q9HBM1 224 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 DMAC2Q9NW81 257 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 ZNHIT6Q9NWK9 470 aaKnown RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 ARHGAP28Q9P2N2 729 aa11.61□□□□□ -0.55
CRTC3-209ENST00000560320 SUCLA2Q9P2R7 463 aaPredicted RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 LUC7L2Q9Y383 392 aaKnown RBP11.61□□□□□ -0.55
CRTC3-209ENST00000560320 KIAA0100Q14667 2235 aaKnown RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 SPTBN5Q9NRC6 3674 aaKnown RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 HNRNPDLO14979 420 aaKnown RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 MAPK13O15264 365 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 STX10O60499 249 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 MFAP3LO75121 409 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 AKAP3O75969 853 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 TBC1D8O95759 1140 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 ZNF286BP0CG31 522 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 HOXD8P13378 290 aaPredicted RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 INSRRP14616 1297 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 GARTP22102 1010 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 CASP14P31944 242 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 MATR3P43243 847 aaKnown RBP eCLIP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 ADKP55263 362 aaKnown RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 IGBP1P78318 339 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 CETN1Q12798 172 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 CCL14Q16627 93 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 FIGNQ5HY92 759 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 TMEM63BQ5T3F8 832 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 SLFN12LQ6IEE8 588 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 INTS8Q75QN2 995 aaKnown RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 METTL13Q8N6R0 699 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 POMGNT1Q8WZA1 660 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
CRTC3-209ENST00000560320 KIFC3Q9BVG8 833 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 KATNAL1Q9BW62 490 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 EDEM3Q9BZQ6 932 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 PCIF1Q9H4Z3 704 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 KIAA1586Q9HCI6 787 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 HSPBP1Q9NZL4 362 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 FLRT1Q9NZU1 646 aa11.6□□□□□ -0.55
CRTC3-209ENST00000560320 IGKV6-21A0A0C4DH24 114 aa11.59□□□□□ -0.55
CRTC3-209ENST00000560320 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
CRTC3-209ENST00000560320 ADCY3O60266 1144 aa11.59□□□□□ -0.55
CRTC3-209ENST00000560320 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
CRTC3-209ENST00000560320 ZEB2O60315 1214 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms