RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 KMT5AQ9NQR1 393 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 ST3GAL5Q9UNP4 418 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 NOC2LQ9Y3T9 749 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 A0A087WWV3 80 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 A0A1B0GVL5 298 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 INO80B-WBP1J3KQ70 363 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 K7ERI5 159 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 CD52P31358 61 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 GIT2Q14161 759 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 GPNMBQ14956 572 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 ARSHQ5FYA8 562 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 C16orf59Q7L2K0 433 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 MAEAQ7L5Y9 396 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 DDX12PQ92771 950 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 C7orf25Q9BPX7 421 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 ST6GALNAC4Q9H4F1 302 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 OLFML3Q9NRN5 406 aa13.3□□□□□ -0.28
RABGGTA-215ENST00000560207 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 ACKR2O00590 384 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 HOXA2O43364 376 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 TRAK2O60296 914 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 EOMESO95936 686 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 ACRP10323 421 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 NPTX2P47972 431 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 PEX3P56589 373 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 STRN3Q13033 797 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 HSP90AA2PQ14568 343 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 NOTUMQ6P988 496 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 FAM228AQ86W67 206 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 FAM178BQ8IXR5 827 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 HACE1Q8IYU2 909 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 FZD8Q9H461 694 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 ELAC1Q9H777 363 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 AGO3Q9H9G7 860 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 AGPAT5Q9NUQ2 364 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
RABGGTA-215ENST00000560207 A0A087X0B3 334 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 ZBBXA8MT70 800 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 ZNF202O95125 648 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 NDUFA8P51970 172 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 NCKAP1LP55160 1127 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 MBTD1Q05BQ5 628 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 MAPK7Q13164 816 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 PSMD2Q13200 908 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 SHHQ15465 462 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 OTOP2Q7RTS6 562 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 DAW1Q8N136 415 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 TMEM40Q8WWA1 233 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 ADPGKQ9BRR6 497 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 GDPD2Q9HCC8 539 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 ARHGAP28Q9P2N2 729 aa13.28□□□□□ -0.28
RABGGTA-215ENST00000560207 A0A0U1RQF3 1178 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 MYMKA6NI61 221 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ENPP3O14638 875 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 N4BP3O15049 544 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 GTPBP6O43824 516 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 KINO60870 393 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ZNF623O75123 536 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 KIF20AO95235 890 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 IDEP14735 1019 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 PTMSP20962 102 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 SARSP49591 514 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 EPHB4P54760 987 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 WDR5P61964 334 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 SMAD3P84022 425 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 PRPF4BQ13523 1007 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 RAB30Q15771 203 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 KYAT1Q16773 422 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 LONRF3Q496Y0 759 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ZPBP2Q6X784 338 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 UNC13DQ70J99 1090 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 DYMQ7RTS9 669 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms