RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 KIAA1024Q9UPX6 916 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 TBKBP1A7MCY6 615 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 GRM6O15303 877 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 SLC26A4O43511 780 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 EYA4O95677 639 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 BMP15O95972 392 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 RAB27AP51159 221 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 MBTD1Q05BQ5 628 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 TFDP1Q14186 410 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 PTPROQ16827 1216 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
SMAD3-213ENST00000560175 CDCA2Q69YH5 1023 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-213ENST00000560175 PADI6Q6TGC4 694 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 PPM1EQ8WY54 764 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 POLR3FQ9H1D9 316 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-213ENST00000560175 COG5Q9UP83 839 aa14.67□□□□□ -0.06
SMAD3-213ENST00000560175 PIN4Q9Y237 131 aaKnown RBP14.67□□□□□ -0.06
SMAD3-213ENST00000560175 MORC2Q9Y6X9 1032 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-213ENST00000560175 PP2D1A8MPX8 630 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 USO1O60763 962 aaKnown RBP14.66□□□□□ -0.06
SMAD3-213ENST00000560175 ITGB1P05556 798 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 CDC25AP30304 524 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 FAM187BQ17R55 369 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 KRT79Q5XKE5 535 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 TWF2Q6IBS0 349 aaKnown RBP14.66□□□□□ -0.06
SMAD3-213ENST00000560175 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 KLHL23Q8NBE8 558 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 SNX29Q8TEQ0 813 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 CCDC51Q96ER9 411 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 AK8Q96MA6 479 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 BHMT2Q9H2M3 363 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 FZD8Q9H461 694 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 GPRC5CQ9NQ84 441 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 DDX19AQ9NUU7 478 aaKnown RBP14.66□□□□□ -0.06
SMAD3-213ENST00000560175 THEGQ9P2T0 379 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 DAXXQ9UER7 740 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-213ENST00000560175 DNM3Q9UQ16 869 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 CUL9Q8IWT3 2517 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 MUC3AQ02505 3323 aa14.66□□□□□ -0.06
SMAD3-213ENST00000560175 NCOR1O75376 2440 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 A0A1B0GUA9 196 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 ARHGEF35A5YM69 484 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 INPPL1O15357 1258 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 TSPAN1O60635 241 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 OFD1O75665 1012 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 DNAJB1P25685 340 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 PLCB3Q01970 1234 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 UBE3AQ05086 875 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 RESTQ13127 1097 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 PTPAQ15257 358 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 CSPP1Q1MSJ5 1256 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 TIGD5Q53EQ6 642 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 AGMOQ6ZNB7 445 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 KCNK18Q7Z418 384 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 COLGALT1Q8NBJ5 622 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 CNNM3Q8NE01 707 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
SMAD3-213ENST00000560175 PNMA5Q96PV4 448 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 ASB2Q96Q27 587 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 AAASQ9NRG9 546 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 MTMR6Q9Y217 621 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 PCDHB2Q9Y5E7 798 aa14.65□□□□□ -0.06
SMAD3-213ENST00000560175 TTC28Q96AY4 2481 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 MEIS3P2A8K0S8 358 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 E9PMD0 336 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 LAG3P18627 525 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
SMAD3-213ENST00000560175 NAMPTP43490 491 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 MRPS5P82675 430 aaKnown RBP14.64□□□□□ -0.07
SMAD3-213ENST00000560175 SF3A1Q15459 793 aaKnown RBP14.64□□□□□ -0.07
SMAD3-213ENST00000560175 CTC1Q2NKJ3 1217 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 C1orf186Q6ZWK4 172 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 DAW1Q8N136 415 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 LRRC43Q8N309 656 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 MICALL1Q8N3F8 863 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 SMG8Q8ND04 991 aaKnown RBP14.64□□□□□ -0.07
SMAD3-213ENST00000560175 KIFAP3Q92845 792 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 PGBD4Q96DM1 585 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 NT5C3AQ9H0P0 336 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 NSUN3Q9H649 340 aaKnown RBP14.64□□□□□ -0.07
SMAD3-213ENST00000560175 ALG13Q9NP73 1137 aaKnown RBP14.64□□□□□ -0.07
SMAD3-213ENST00000560175 HCSTQ9UBK5 93 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 LZTS1Q9Y250 596 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 PCDHB12Q9Y5F1 795 aa14.64□□□□□ -0.07
SMAD3-213ENST00000560175 VPS37CA5D8V6 355 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-213ENST00000560175 VWA3AA6NCI4 1184 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 INO80B-WBP1J3KQ70 363 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 ERLIN2O94905 339 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 BMP1P13497 986 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 PDIA4P13667 645 aaKnown RBP14.63□□□□□ -0.07
SMAD3-213ENST00000560175 ARF4P18085 180 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-213ENST00000560175 TMEM119Q4V9L6 283 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 TJAP1Q5JTD0 557 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 RINT1Q6NUQ1 792 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 NOTUMQ6P988 496 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 KCNT2Q6UVM3 1135 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 MAEAQ7L5Y9 396 aa14.63□□□□□ -0.07
SMAD3-213ENST00000560175 SYT2Q8N9I0 419 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms