RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ODR4Q5SWX8 454 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 CDCA2Q69YH5 1023 aaPredicted RBP10.36□□□□□ -0.75
HERC1-206ENST00000559996 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 C11orf57Q6ZUT1 292 aaPredicted RBP10.36□□□□□ -0.75
HERC1-206ENST00000559996 FAM126BQ8IXS8 530 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 ADSSL1Q8N142 457 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 METTL13Q8N6R0 699 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 DNAJB3Q8WWF6 145 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 TCP11Q8WWU5 503 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 VTI1AQ96AJ9 217 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 PAWRQ96IZ0 340 aaKnown RBP10.36□□□□□ -0.75
HERC1-206ENST00000559996 ZNF668Q96K58 619 aaPredicted RBP10.36□□□□□ -0.75
HERC1-206ENST00000559996 DRC1Q96MC2 740 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
HERC1-206ENST00000559996 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 TRPV6Q9H1D0 765 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 MINDY3Q9H8M7 445 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 C17orf75Q9HAS0 396 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 SEL1LQ9UBV2 794 aa10.36□□□□□ -0.75
HERC1-206ENST00000559996 A0A087WZ62 844 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 ASAP2O43150 1006 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 TGFB1I1O43294 461 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 PRPF6O94906 941 aaKnown RBP10.35□□□□□ -0.75
HERC1-206ENST00000559996 CHRNA1P02708 482 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 KRT18P05783 430 aaKnown RBP10.35□□□□□ -0.75
HERC1-206ENST00000559996 GNAT1P11488 350 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 CAPN2P17655 700 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 NAMPTP43490 491 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 GPC3P51654 580 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 PTENP60484 403 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 PTK7Q13308 1070 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 MXD4Q14582 209 aaPredicted RBP10.35□□□□□ -0.75
HERC1-206ENST00000559996 GPNMBQ14956 572 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 PTGISQ16647 500 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 BMT2Q1RMZ1 405 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 ANKRD33Q7Z3H0 272 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 HAUS6Q7Z4H7 955 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 RHPN2Q8IUC4 686 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 NME8Q8N427 588 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 TMEM40Q8WWA1 233 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 PSPC1Q8WXF1 523 aaKnown RBP10.35□□□□□ -0.75
HERC1-206ENST00000559996 CCDC34Q96HJ3 373 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 FDXACB1Q9BRP7 624 aaPredicted RBP10.35□□□□□ -0.75
HERC1-206ENST00000559996 MFRPQ9BY79 579 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 SEZ6LQ9BYH1 1024 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 KCTD10Q9H3F6 313 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 EXOC1Q9NV70 894 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 LARSQ9P2J5 1176 aaKnown RBP10.35□□□□□ -0.75
HERC1-206ENST00000559996 MAPK8IP1Q9UQF2 711 aa10.35□□□□□ -0.75
HERC1-206ENST00000559996 TBCAO75347 108 aaKnown RBP10.34□□□□□ -0.75
HERC1-206ENST00000559996 CSDE1O75534 798 aaKnown RBP10.34□□□□□ -0.75
HERC1-206ENST00000559996 SRGAP2CP0DJJ0 459 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 NLRP11P59045 1033 aaKnown RBP10.34□□□□□ -0.75
HERC1-206ENST00000559996 RBL2Q08999 1139 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 FAAP100Q0VG06 881 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 NCAPHQ15003 741 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 IQCB1Q15051 598 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 AMHR2Q16671 573 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 LRRC26Q2I0M4 334 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 ZCWPW2Q504Y3 356 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 FAM47CQ5HY64 1035 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 FAM26DQ5JW98 314 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 CENPPQ6IPU0 288 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 FAM178BQ8IXR5 827 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 GUF1Q8N442 669 aaKnown RBP10.34□□□□□ -0.75
HERC1-206ENST00000559996 MLKLQ8NB16 471 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 RNF149Q8NC42 400 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 CCDC43Q96MW1 224 aaKnown RBP10.34□□□□□ -0.75
HERC1-206ENST00000559996 TOX2Q96NM4 488 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 NFKBIZQ9BYH8 718 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 HSD3B7Q9H2F3 369 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 FZD8Q9H461 694 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 RMND1Q9NWS8 449 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 USP20Q9Y2K6 914 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 ZMYM2Q9UBW7 1377 aa10.34□□□□□ -0.75
HERC1-206ENST00000559996 SIP14410 1827 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 MKI67P46013 3256 aaKnown RBP10.33□□□□□ -0.76
HERC1-206ENST00000559996 CCDC169A6NNP5 214 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 ABLIM1O14639 778 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 EIF3DO15371 548 aaKnown RBP eCLIP10.33□□□□□ -0.76
HERC1-206ENST00000559996 TMOD1P28289 359 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 DNM2P50570 870 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 MBTD1Q05BQ5 628 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 TMEM62Q0P6H9 643 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 KIZQ2M2Z5 673 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 ANO6Q4KMQ2 910 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 L1TD1Q5T7N2 865 aaKnown RBP10.33□□□□□ -0.76
HERC1-206ENST00000559996 ANKRD40Q6AI12 368 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 TAF2Q6P1X5 1199 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 SLC39A4Q6P5W5 647 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 SASS6Q6UVJ0 657 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 ZNF687Q8N1G0 1237 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
HERC1-206ENST00000559996 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
HERC1-206ENST00000559996 VWCEQ96DN2 955 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms