RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 FOXQ1Q9C009 403 aa12.18□□□□□ -0.46
TRAF3-207ENST00000559734 MRPL17Q9NRX2 175 aaKnown RBP12.18□□□□□ -0.46
TRAF3-207ENST00000559734 VPS13AQ96RL7 3174 aa12.18□□□□□ -0.46
TRAF3-207ENST00000559734 IGLV3-22A0A075B6J6 115 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 CCDC195A0A1B0GUA6 201 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 CARNS1A5YM72 827 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 POTEMA6NI47 508 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 CHMP2AO43633 222 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 B4GALT3O60512 393 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 URODP06132 367 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 SFPQP23246 707 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAF3-207ENST00000559734 SETQ01105 290 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-207ENST00000559734 DRP2Q13474 957 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 COL9A3Q14050 684 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-207ENST00000559734 PRR16Q569H4 304 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 ELMSAN1Q6PJG2 1045 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 ZNF280BQ86YH2 543 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 SMG7Q92540 1137 aaKnown RBP12.17□□□□□ -0.46
TRAF3-207ENST00000559734 FAM193BQ96PV7 902 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-207ENST00000559734 PIDD1Q9HB75 910 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
TRAF3-207ENST00000559734 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 FAM105AQ9NUU6 356 aa12.17□□□□□ -0.46
TRAF3-207ENST00000559734 C2orf16Q68DN1 1984 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 A0A087WZ62 844 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 SGSM2O43147 1006 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 LRRN2O75325 713 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 OFD1O75665 1012 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 RFPL2O75678 378 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 GLUD1P00367 558 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 SKIP12755 728 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 LIFRP42702 1097 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 MTERF2Q49AM1 385 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 FDXACB1Q9BRP7 624 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-207ENST00000559734 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 CHST12Q9NRB3 414 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
TRAF3-207ENST00000559734 EPS15L1Q9UBC2 864 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 SEPT9Q9UHD8 586 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-207ENST00000559734 FAN1Q9Y2M0 1017 aa12.16□□□□□ -0.46
TRAF3-207ENST00000559734 PRG3Q9Y2Y8 225 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-207ENST00000559734 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-207ENST00000559734 EP300Q09472 2414 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-207ENST00000559734 WDR64B1ANS9 1081 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 ZNF862O60290 1169 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 DDHD2O94830 711 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 POMCP01189 267 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 ADH1AP07327 375 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 SPATA31D3P0C874 917 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 CLK2P49760 499 aaKnown RBP12.15□□□□□ -0.46
TRAF3-207ENST00000559734 UGCGQ16739 394 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 RTN1Q16799 776 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 SPATA31D4Q6ZUB0 917 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 SUMF1Q8NBK3 374 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 CMASQ8NFW8 434 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-207ENST00000559734 PJA1Q8NG27 643 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 NLRP4Q96MN2 994 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 SH2D3AQ9BRG2 576 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 SPATA6Q9NWH7 488 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-207ENST00000559734 BARHL2Q9NY43 387 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 DLGAP2Q9P1A6 1054 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 CDV3Q9UKY7 258 aaKnown RBP12.15□□□□□ -0.46
TRAF3-207ENST00000559734 NUMBLQ9Y6R0 609 aa12.15□□□□□ -0.46
TRAF3-207ENST00000559734 CACNA1BQ00975 2339 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 TEX28O15482 410 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 ALDH2P05091 517 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 GLULP15104 373 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 RAB27AP51159 221 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 ATXN1P54253 815 aaKnown RBP12.14□□□□□ -0.47
TRAF3-207ENST00000559734 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
TRAF3-207ENST00000559734 RHPN2Q8IUC4 686 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-207ENST00000559734 NXPE3Q969Y0 559 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 RPS6KC1Q96S38 1066 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 HERC2P3Q9BVR0 1158 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 RSAD1Q9HA92 442 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 STK39Q9UEW8 545 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 DPP7Q9UHL4 492 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 NAP1L2Q9ULW6 460 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-207ENST00000559734 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 PCDHB2Q9Y5E7 798 aa12.14□□□□□ -0.47
TRAF3-207ENST00000559734 MYH9P35579 1960 aaKnown RBP12.13□□□□□ -0.47
TRAF3-207ENST00000559734 TMEM150BA6NC51 233 aa12.13□□□□□ -0.47
TRAF3-207ENST00000559734 GOLGA8AA7E2F4 631 aa12.13□□□□□ -0.47
TRAF3-207ENST00000559734 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
TRAF3-207ENST00000559734 NRP1O14786 923 aa12.13□□□□□ -0.47
TRAF3-207ENST00000559734 SLC27A2O14975 620 aa12.13□□□□□ -0.47
TRAF3-207ENST00000559734 LAMTOR5O43504 91 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms