RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 GPBP1Q86WP2 473 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 NPAS4Q8IUM7 802 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 RASSF8Q8NHQ8 419 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 KCNG4Q8TDN1 519 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 NFKBIZQ9BYH8 718 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 ZNF576Q9H609 170 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 RNF19AQ9NV58 838 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 CFAP45Q9UL16 551 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 PIN4Q9Y237 131 aaKnown RBP21.59■■□□□ 1.05
SHF-205ENST00000559566 USP20Q9Y2K6 914 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 INO80B-WBP1J3KQ70 363 aa21.58■■□□□ 1.05
SHF-205ENST00000559566 ATF7P17544 494 aaPredicted RBP21.58■■□□□ 1.05
SHF-205ENST00000559566 NCLP19338 710 aaKnown RBP21.58■■□□□ 1.05
SHF-205ENST00000559566 NAMPTP43490 491 aa21.58■■□□□ 1.05
SHF-205ENST00000559566 GRIN2CQ14957 1233 aa21.58■■□□□ 1.05
SHF-205ENST00000559566 SP7Q8TDD2 431 aaPredicted RBP21.58■■□□□ 1.05
SHF-205ENST00000559566 LARP4BQ92615 738 aaKnown RBP21.58■■□□□ 1.05
SHF-205ENST00000559566 KIFAP3Q92845 792 aa21.58■■□□□ 1.05
SHF-205ENST00000559566 ZNF689Q96CS4 500 aaPredicted RBP21.58■■□□□ 1.05
SHF-205ENST00000559566 GUCD1Q96NT3 240 aa21.58■■□□□ 1.05
SHF-205ENST00000559566 C1orf112Q9NSG2 853 aa21.58■■□□□ 1.05
SHF-205ENST00000559566 LINC01553A4QN01 128 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 EPOPA6NHQ4 379 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 DGKIO75912 1065 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 ZSCAN20P17040 1043 aaPredicted RBP21.57■■□□□ 1.04
SHF-205ENST00000559566 ME1P48163 572 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 PEX3P56589 373 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 UBXN11Q5T124 520 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 RRAGBQ5VZM2 374 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 PPP2R2DQ66LE6 453 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 ECHDC2Q86YB7 292 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 PDILTQ8N807 584 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 CPB2Q96IY4 423 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 YME1L1Q96TA2 773 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 CCDC113Q9H0I3 377 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 CERS4Q9HA82 394 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 SLC28A3Q9HAS3 691 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 GDPD2Q9HCC8 539 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 MTMR10Q9NXD2 777 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 INSL6Q9Y581 213 aa21.57■■□□□ 1.04
SHF-205ENST00000559566 TMEM265A0A087WTH1 108 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 LINC00271P0C7V0 271 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 FGFR1P11362 822 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 NPTX2P47972 431 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 KRT85P78386 507 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 E2F4Q16254 413 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 ZNF598Q86UK7 904 aaKnown RBP21.56■■□□□ 1.04
SHF-205ENST00000559566 CDR2LQ86X02 465 aaPredicted RBP21.56■■□□□ 1.04
SHF-205ENST00000559566 REEP2Q9BRK0 252 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 CHST12Q9NRB3 414 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 CCDC39Q9UFE4 941 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 TTC3P53804 2025 aa21.56■■□□□ 1.04
SHF-205ENST00000559566 MEIS3P2A8K0S8 358 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 ARF4P18085 180 aaPredicted RBP21.55■■□□□ 1.04
SHF-205ENST00000559566 TXLNAP40222 546 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 NUCB2P80303 420 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 GIT2Q14161 759 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 TAS1R3Q7RTX0 852 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 DEPTORQ8TB45 409 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 FZD8Q9H461 694 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 HCSTQ9UBK5 93 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 STK17AQ9UEE5 414 aa21.55■■□□□ 1.04
SHF-205ENST00000559566 A0A0U1RQF3 1178 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 MYMKA6NI61 221 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 RFXAPO00287 272 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 ERLIN2O94905 339 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 LONRF3Q496Y0 759 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 PAN2Q504Q3 1202 aaKnown RBP21.54■■□□□ 1.04
SHF-205ENST00000559566 RESP18Q5W5W9 173 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 TWF2Q6IBS0 349 aaKnown RBP21.54■■□□□ 1.04
SHF-205ENST00000559566 PPP4R3CPQ6ZMV5 832 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 FAM43BQ6ZT52 329 aaPredicted RBP21.54■■□□□ 1.04
SHF-205ENST00000559566 LPPQ93052 612 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 IFT74Q96LB3 600 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 SPATA32Q96LK8 384 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 DRC1Q96MC2 740 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 C17orf80Q9BSJ5 609 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 TIPINQ9BVW5 301 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 TRAIPQ9BWF2 469 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 EIF2AQ9BY44 585 aaKnown RBP21.54■■□□□ 1.04
SHF-205ENST00000559566 ELAC1Q9H777 363 aaKnown RBP21.54■■□□□ 1.04
SHF-205ENST00000559566 TMEM161AQ9NX61 479 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 KCND2Q9NZV8 630 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 CHD7Q9P2D1 2997 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 LRFN2Q9ULH4 789 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 PCDHB7Q9Y5E2 793 aa21.54■■□□□ 1.04
SHF-205ENST00000559566 CCDC169A6NNP5 214 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 SLC16A4O15374 487 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 STAG3L1P0CL83 205 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 PLS3P13797 630 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 LIG1P18858 919 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
SHF-205ENST00000559566 STAT6P42226 847 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 PPP2R5AQ15172 486 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 CLLU1OSQ5K130 101 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 CCDC73Q6ZRK6 1079 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 ZBTB8OSQ8IWT0 167 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 RNF169Q8NCN4 708 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 STAMQ92783 540 aa21.53■■□□□ 1.04
SHF-205ENST00000559566 C2orf40Q9H1Z8 148 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms