RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 FERP16591 822 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 ATP5OP48047 213 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 YBEYP58557 167 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 IL2P60568 153 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 USP4Q13107 963 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 BECN1Q14457 450 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 NAA16Q6N069 864 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 LEKR1Q6ZMV7 388 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 RNF19BQ6ZMZ0 732 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 RNF168Q8IYW5 571 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 CCDC116Q8IYX3 515 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 WDR24Q96S15 920 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 MMADHCQ9H3L0 296 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 ANKRD36CQ5JPF3 1778 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 PLD2O14939 933 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 TMEM11P17152 192 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 ATP5F1P24539 256 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 CLCQ05315 142 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 LBRQ14739 615 aaKnown RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZYXQ15942 572 aaKnown RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZNF674Q2M3X9 581 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 ELMSAN1Q6PJG2 1045 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 MICALCLQ6ZW33 695 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 NANOGNBQ7Z5D8 188 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 MOSPD2Q8NHP6 518 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 TTC12Q9H892 705 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 BOLA1Q9Y3E2 137 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 BCL9LQ86UU0 1499 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 USP19O94966 1318 aa6.31□□□□□ -1.4
CTDSPL2-206ENST00000559175 CEP104O60308 925 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 RNF40O75150 1001 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SIN3BO75182 1162 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZPR1O75312 459 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 HNRNPH2P55795 449 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SGCGQ13326 291 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SHC3Q92529 594 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 USP13Q92995 863 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 DHTKD1Q96HY7 919 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 UNC93B1Q9H1C4 597 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 MARK1Q9P0L2 795 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 RPS6KA6Q9UK32 745 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 METP08581 1390 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 FZD9O00144 591 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PPEF1O14829 653 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 HOXC11O43248 304 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 BAG2O95816 211 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SCNN1BP51168 640 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 AFF3P51826 1226 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 GRM2Q14416 872 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARID5BQ14865 1188 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CFAP100Q494V2 611 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 C1orf141Q5JVX7 400 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 GPR139Q6DWJ6 353 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 B3GNT9Q6UX72 402 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CHD1LQ86WJ1 897 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 FAM9CQ8IZT9 166 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SLC7A14Q8TBB6 771 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 STK31Q9BXU1 1019 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 TXLNGYQ9BZA5 131 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 RNF38Q9H0F5 515 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 VCX3BQ9H321 246 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 OSBPL3Q9H4L5 887 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 C11orf16Q9NQ32 467 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CCDC177Q9NQR7 707 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CABP1Q9NZU7 370 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 ORC3Q9UBD5 711 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 EDARQ9UNE0 448 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA9Q9Y5G4 932 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA7Q9Y5G6 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA6Q9Y5G7 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCDHGA2Q9Y5H1 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 DDX60Q8IY21 1712 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 KRT87PA6NCN2 255 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 TBKBP1A7MCY6 615 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 UPK3BL1B0FP48 263 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 UPK3BL2E5RIL1 263 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 H7C0S8 307 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SCAND1P57086 179 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 C21orf58P58505 322 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 FAM209BQ5JX69 171 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CCDC183Q5T5S1 534 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 OLFM4Q6UX06 510 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CYP2U1Q7Z449 544 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 AVL9Q8NBF6 648 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 KRT35Q92764 455 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 NAP1L3Q99457 506 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 EDEM3Q9BZQ6 932 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 TRIM5Q9C035 493 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 ABCB6Q9NP58 842 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 CTNNA3Q9UI47 895 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 VPS28Q9UK41 221 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 PTPN22Q9Y2R2 807 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms