RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 ZBTB8OSQ8IWT0 167 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 FAM178BQ8IXR5 827 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 AGO3Q9H9G7 860 aaKnown RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 LARSQ9P2J5 1176 aaKnown RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 TRAK2O60296 914 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 RPN1P04843 607 aaKnown RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 DARSP14868 501 aaKnown RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 EIF4BP23588 611 aaKnown RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 NAMPTP43490 491 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 GPNMBQ14956 572 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 TCTN1Q2MV58 587 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 ZC2HC1CQ53FD0 456 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 ISM2Q6H9L7 571 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 TSHZ1Q6ZSZ6 1077 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 FAM228AQ86W67 206 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 CCDC34Q96HJ3 373 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 FGFBP2Q9BYJ0 223 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 IFIH1Q9BYX4 1025 aaKnown RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
GABPB1-208ENST00000558970 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 PADI3Q9ULW8 664 aa13.71□□□□□ -0.21
GABPB1-208ENST00000558970 LAMA3Q16787 3333 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 GBF1Q92538 1859 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 DENND3A2RUS2 1198 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 ERLIN2O94905 339 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 GCNT3O95395 438 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 EDN1P05305 212 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 ZNF131P52739 623 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 SMTNP53814 917 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 EPHB4P54760 987 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 PTENP60484 403 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 MBTD1Q05BQ5 628 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 DPYDQ12882 1025 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 KMT5BQ4FZB7 885 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 GLIS3Q8NEA6 775 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 DBF4BQ8NFT6 615 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 CPB2Q96IY4 423 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
GABPB1-208ENST00000558970 ST3GAL5Q9UNP4 418 aa13.7□□□□□ -0.22
GABPB1-208ENST00000558970 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 BIN1O00499 593 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 B4GALT5O43286 388 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 KLRC4O43908 158 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 PRKCBP05771 671 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 MYBP10242 640 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 GAP43P17677 238 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
GABPB1-208ENST00000558970 CASP5P51878 434 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.22
GABPB1-208ENST00000558970 CDCA2Q69YH5 1023 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-208ENST00000558970 GPR153Q6NV75 609 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 HAUS6Q7Z4H7 955 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 BICD1Q96G01 975 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 NUP62CLQ9H1M0 184 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 C17orf75Q9HAS0 396 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
GABPB1-208ENST00000558970 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
GABPB1-208ENST00000558970 PHLPP2Q6ZVD8 1323 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 K7ERI5 159 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 TSPAN1O60635 241 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 PRPF6O94906 941 aaKnown RBP13.68□□□□□ -0.22
GABPB1-208ENST00000558970 MBD3O95983 291 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 RFC2P35250 354 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 NCKAP1LP55160 1127 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 STRN3Q13033 797 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 MAPK6Q16659 721 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 PLEKHG4Q58EX7 1191 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 TAS1R3Q7RTX0 852 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 SEPT8Q92599 483 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
GABPB1-208ENST00000558970 VWCEQ96DN2 955 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
GABPB1-208ENST00000558970 IKZF4Q9H2S9 585 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 ERVK-5Q9HDB9 667 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 MAPK8IP1Q9UQF2 711 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 PCDHA5Q9Y5H7 936 aa13.68□□□□□ -0.22
GABPB1-208ENST00000558970 GPR182O15218 404 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 MGEA5O60502 916 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms