RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 GNAT1P11488 350 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 GUCY2CP25092 1073 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 CDC25AP30304 524 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 YWHABP31946 246 aaKnown RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 PBX1P40424 430 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 PRCPP42785 496 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 GNG11P61952 73 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 ZNF200P98182 395 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 CDC42EP1Q00587 391 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 RBL2Q08999 1139 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 GRB10Q13322 594 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 TARBP2Q15633 366 aaKnown RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 PTPN21Q16825 1174 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 KIAA0753Q2KHM9 967 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 ZNF484Q5JVG2 852 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 MARCH8Q5T0T0 291 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 GDF6Q6KF10 455 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 SV2BQ7L1I2 683 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 C16orf59Q7L2K0 433 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 RPAINQ86UA6 219 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 TRIM50Q86XT4 487 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 CREBRFQ8IUR6 639 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 REXO1L1PQ8IX06 675 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 SYT2Q8N9I0 419 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 SLC17A8Q8NDX2 589 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 ZNF397Q8NF99 534 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 LARP4BQ92615 738 aaKnown RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 P2RX5Q93086 422 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 WNT8BQ93098 351 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 PLIN2Q99541 437 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 C7orf25Q9BPX7 421 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 NOC4LQ9BVI4 516 aaKnown RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 TRIM9Q9C026 710 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 VPS16Q9H269 839 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 TRMT13Q9NUP7 481 aaKnown RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 HDAC6Q9UBN7 1215 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 GTF2IRD1Q9UHL9 959 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 ZMYND8Q9ULU4 1186 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 NR2E3Q9Y5X4 410 aa8.44□□□□□ -1.06
LRRC28-211ENST00000558890 TRIP12Q14669 1992 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-211ENST00000558890 A0A1W2PQC6 194 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 MBLAC1A4D2B0 266 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 LRRC10BA6NIK2 292 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 ZBTB42B2RXF5 422 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 PES1O00541 588 aaKnown RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 BACH1O14867 736 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 TEX33O43247 280 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 KLRC4O43908 158 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 KIF5CO60282 957 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 ZNF862O60290 1169 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 PQBP1O60828 265 aaKnown RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 MED24O75448 989 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 URI1O94763 535 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 TIMP1P01033 207 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CLTBP09497 229 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 SYN1P17600 705 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CCNE1P24864 410 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CASP14P31944 242 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 BMP8BP34820 402 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 RARRES1P49788 294 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 EPHB4P54760 987 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 PRKCEQ02156 737 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 UBXN1Q04323 297 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 POU5F1BQ06416 359 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 MFSD10Q14728 455 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 TSR1Q2NL82 804 aaKnown RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 SWSAP1Q6NVH7 229 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 POTEHQ6S545 545 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CYP26C1Q6V0L0 522 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 TOGARAM2Q6ZUX3 1019 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 TMTC1Q8IUR5 882 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 MCPH1Q8NEM0 835 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 TET1Q8NFU7 2136 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CPLX3Q8WVH0 158 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 RAD54LQ92698 747 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 GLG1Q92896 1179 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 IQCDQ96DY2 449 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 DYDC2Q96IM9 177 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 CEP89Q96ST8 783 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 DHX33Q9H6R0 707 aaKnown RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 ARGLU1Q9NWB6 273 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-211ENST00000558890 GABBR1Q9UBS5 961 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 SEL1LQ9UBV2 794 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 MAPK8IP1Q9UQF2 711 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 UMODL1Q5DID0 1318 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 SIP14410 1827 aa8.43□□□□□ -1.06
LRRC28-211ENST00000558890 MYH11P35749 1972 aa8.42□□□□□ -1.06
LRRC28-211ENST00000558890 IGKV6-21A0A0C4DH24 114 aa8.42□□□□□ -1.06
LRRC28-211ENST00000558890 PVALEFA0A1B0GWK0 134 aa8.42□□□□□ -1.06
LRRC28-211ENST00000558890 POTEB3A0JP26 581 aa8.42□□□□□ -1.06
LRRC28-211ENST00000558890 SOWAHDA6NJG2 315 aa8.42□□□□□ -1.06
LRRC28-211ENST00000558890 DCDC2CA8MYV0 355 aa8.42□□□□□ -1.06
LRRC28-211ENST00000558890 DDX39AO00148 427 aaKnown RBP8.42□□□□□ -1.06
LRRC28-211ENST00000558890 CHMP2AO43633 222 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms