RNA–Protein interactions for RNA: ENST00000558843.5

COPS2-205, Transcript of COP9 signalosome subunit 2, human

TSL 1 (best)

Gene COPS2, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS2-205	ENST00000558843	NAF1	Q96HR8	494 aa	Known RBP	5.72	□□□□□ -1.49
COPS2-205	ENST00000558843	C16orf92	Q96LL3	132 aa		5.72	□□□□□ -1.49
COPS2-205	ENST00000558843	DEPDC7	Q96QD5	511 aa		5.72	□□□□□ -1.49
COPS2-205	ENST00000558843	SYNPO2L	Q9H987	977 aa		5.72	□□□□□ -1.49
COPS2-205	ENST00000558843	COL4A3	Q01955	1670 aa		5.72	□□□□□ -1.49
COPS2-205	ENST00000558843	CENPVL1	A0A0U1RR11	272 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	FAM221B	A6H8Z2	402 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	GLRX3	O76003	335 aa	Known RBP	5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	GYPE	P15421	78 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	STRIP1	Q5VSL9	837 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	OLFML1	Q6UWY5	402 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	CHST14	Q8NCH0	376 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	ZNF428	Q96B54	188 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	FAM193B	Q96PV7	902 aa	Predicted RBP	5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	ADARB2	Q9NS39	739 aa	Known RBP	5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	PODXL2	Q9NZ53	605 aa		5.71	□□□□□ -1.5
COPS2-205	ENST00000558843	LAG3	P18627	525 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	PTTG1IP	P53801	180 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	SERINC3	Q13530	473 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	EPHA7	Q15375	998 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	ZKSCAN2	Q63HK3	967 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843		Q6YL49	198 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	DDX53	Q86TM3	631 aa	Known RBP	5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	KIAA1958	Q8N8K9	716 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	ZSWIM2	Q8NEG5	633 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	CYP4F11	Q9HBI6	524 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	SNTG2	Q9NY99	539 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	EIF2B4	Q9UI10	523 aa	Known RBP	5.7	□□□□□ -1.5
COPS2-205	ENST00000558843	SYNPO2	Q9UMS6	1093 aa		5.7	□□□□□ -1.5
COPS2-205	ENST00000558843		A0A0A6YYJ9	748 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	AHRR	A9YTQ3	701 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843		H7C1D1	291 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	KIAA0355	O15063	1070 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	LPXN	O60711	386 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	CYP17A1	P05093	508 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	PTX3	P26022	381 aa	Predicted RBP	5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	COLEC12	Q5KU26	742 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	NME9	Q86XW9	330 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	MYEOV	Q96EZ4	313 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	UIMC1	Q96RL1	719 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	SLC46A2	Q9BY10	475 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	ENKD1	Q9H0I2	346 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	KCNH6	Q9H252	994 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	MTG2	Q9H4K7	406 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843	SAMD15	Q9P1V8	674 aa		5.69	□□□□□ -1.5
COPS2-205	ENST00000558843		A0A0A6YYK5	440 aa	Predicted RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	CCDC163	A0A0D9SF12	145 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	PTPDC1	A2A3K4	754 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	CFB	P00751	764 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	ZNF37A	P17032	561 aa	Predicted RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	ZEB1	P37275	1124 aa	Predicted RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	CLK3	P49761	638 aa	Known RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	FAM189B	P81408	668 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	ADCY2	Q08462	1091 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	ZNF174	Q15697	407 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	KANSL1	Q7Z3B3	1105 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	LRP10	Q7Z4F1	713 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	DNAJC7	Q99615	494 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	SOX7	Q9BT81	388 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	CPEB1	Q9BZB8	566 aa	Known RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	OSBPL6	Q9BZF3	934 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	NCOA5	Q9HCD5	579 aa	Known RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	ING3	Q9NXR8	418 aa		5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	TNPO3	Q9Y5L0	923 aa	Known RBP	5.68	□□□□□ -1.5
COPS2-205	ENST00000558843	NRP1	O14786	923 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	HOXA3	O43365	443 aa	Predicted RBP	5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	OPHN1	O60890	802 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	FSBP	O95073	299 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	ATP2B1	P20020	1258 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	CD38	P28907	300 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	TAP1	Q03518	808 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	VPS72	Q15906	364 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	MAN2A1	Q16706	1144 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	ESRP1	Q6NXG1	681 aa	Known RBP	5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	C7orf31	Q8N865	590 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	JMY	Q8N9B5	988 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	OR52N2	Q8NGI0	321 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	PDCD2L	Q9BRP1	358 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	TANGO6	Q9C0B7	1094 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	EPC1	Q9H2F5	836 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	ANKFY1	Q9P2R3	1169 aa		5.67	□□□□□ -1.5
COPS2-205	ENST00000558843	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
COPS2-205	ENST00000558843		B4E1Z4	1266 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	PRPF6	O94906	941 aa	Known RBP	5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	APOL3	O95236	402 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	GAA	P10253	952 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	APOBEC3A	P31941	199 aa	Predicted RBP	5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	IGFALS	P35858	605 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	RANGAP1	P46060	587 aa	Predicted RBP	5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	ADCY1	Q08828	1119 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	NAALADL2	Q58DX5	795 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	METTL24	Q5JXM2	366 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	UNQ6494/PRO21346	Q6UXR6	183 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	PHYKPL	Q8IUZ5	450 aa		5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.66	□□□□□ -1.5
COPS2-205	ENST00000558843	PIK3C3	Q8NEB9	887 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms