RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 DMP1Q13316 513 aaPredicted RBP17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 TMEM119Q4V9L6 283 aa17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 RTN4RL1Q86UN2 441 aaPredicted RBP17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 UBN1Q9NPG3 1134 aa17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 STK17AQ9UEE5 414 aa17.47■□□□□ 0.39
RABGGTA-205ENST00000558534 FNDC1Q4ZHG4 1894 aaPredicted RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 SSBP05455 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 PLA2G4BP0C869 781 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 MARCKSP29966 332 aaPredicted RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 SMTNP53814 917 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 GRIN2CQ14957 1233 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 ECM1Q16610 540 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 MAPK6Q16659 721 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 NAALADL2Q58DX5 795 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 CDCA2Q69YH5 1023 aaPredicted RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 MAEAQ7L5Y9 396 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 GUCD1Q96NT3 240 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 PYM1Q9BRP8 204 aaKnown RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 PLVAPQ9BX97 442 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 TMEM117Q9H0C3 514 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 ODF2LQ9ULJ1 636 aa17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
RABGGTA-205ENST00000558534 MGEA5O60502 916 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 GRB10Q13322 594 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 TMEM132AQ24JP5 1023 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 RINT1Q6NUQ1 792 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 ECHDC2Q86YB7 292 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 CRIPAKQ8N1N5 446 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 SLC17A8Q8NDX2 589 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 FBXO22Q8NEZ5 403 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 ARNTL2Q8WYA1 636 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 LARP4BQ92615 738 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 PNMA5Q96PV4 448 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 C11orf84Q9BUA3 381 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 TRIM6Q9C030 488 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 LRRC27Q9C0I9 530 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 CSRNP2Q9H175 543 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 RC3H2Q9HBD1 1191 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 FAM105AQ9NUU6 356 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 LARSQ9P2J5 1176 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 CNTNAP2Q9UHC6 1331 aa17.45■□□□□ 0.38
RABGGTA-205ENST00000558534 LCHNA4D1U4 455 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 CUTAO60888 179 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 ZNF623O75123 536 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 KRT18P05783 430 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 FGFR4P22455 802 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 KRT85P78386 507 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 NUCB2P80303 420 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 MBTD1Q05BQ5 628 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 PTPROQ16827 1216 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 RRAGBQ5VZM2 374 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 C1orf186Q6ZWK4 172 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 LRRC43Q8N309 656 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 SYMPKQ92797 1274 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 CLP1Q92989 425 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 GPRC5CQ9NQ84 441 aa17.44■□□□□ 0.38
RABGGTA-205ENST00000558534 A0A087WWV3 80 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 N4BP3O15049 544 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 HIP1RO75146 1068 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 CSDE1O75534 798 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 BRD1O95696 1058 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 PLCG1P19174 1290 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 IBSPP21815 317 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 DDIT3P35638 169 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 SLC12A3P55017 1021 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 KARSQ15046 597 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 SPOUT1Q5T280 376 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 GLB1LQ6UWU2 654 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 RAD54LQ92698 747 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 LMAN2LQ9H0V9 348 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 PCDHB12Q9Y5F1 795 aa17.43■□□□□ 0.38
RABGGTA-205ENST00000558534 ZMYM2Q9UBW7 1377 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 CCDC169A6NNP5 214 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 C5orf67F2Z3F1 127 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 K7ERI5 159 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 TSPAN1O60635 241 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 TBCAO75347 108 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 LAG3P18627 525 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 POU3F3P20264 500 aaPredicted RBP17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 CTNNB1P35222 781 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms